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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAAATATATGAAATTGCAATCAATGGTTCAGATGAAGAAAAGATATCTGCTGCTACCATTCTATGTGGGGCATCTCTGGTACGTGGTTGGAATGTACAGgtactgtttttggctttccaattatttcaaagacttctacttttttttgaaaaagttttttttagcttgtttggttgtcttctgtctcttctttaattttgtctctattttttaagtttacattatcaattttgtttgcag

Basic information

species Glycine max
transcript GLYMA03G30760.1
intron # 11
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G30760.1 (Glycine max), 5'ss of exon 11
lower sequence: Vv07s0104g00390.t01 (Vitis vinifera), 5'ss of exon 9
GAAAATATATGAAATTGCAATCAATGGTTCAGATGAAGAAAAGATATCTGCTGCTACCATTCTATGTGGGGCATCTCTGGTACGTGGTTGGAATGTACAGgtac-tgt--------ttttggctttccaattatttcaaagacttctacttttttttgaaaaagtttttttt-------------------agcttgtttggtt------gtcttctg------tctcttctttaattttgtctctattttttaagtttacatta-tcaattttgtttgcag
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GAAAATCTATGAGATAGCAGTCAATGGTTCAGATGATGAGAAGATATCTGCTGCAGCAATTCTTTGTGGGGCTTCTCTAGTTCGTGGTTGGAATATACAGgtaaatgccaaggaagtgtttttgttgggtttacttaaaagggcattgtgtttttttaatattctcttttgcttgattatcatggaagagcagtatgtctgattatttttgtcttctgaagtcacctctttttctttttgatccatttgttacaagtatattttggtctatgttgcttgcag