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AGGACGTGAAAATATTGATCCAGATGCCCTTCCTTTTGCAAGAAATTTGAAAGAAATGGATCGCCAAGGACTGAGGGAAGGAGCAAGCCTCGTGGAAGTGgttcgtgaaaatattgctttagatgctaatatgaattattaaaatcatgatatggaataaatcaaaattctaaaaagaataattgatttagttattactt...
species | Glycine max |
transcript | GLYMA03G24630.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: AAGAAATGGATCGCCAAGGACTGAGGGAAGGAGCAAGCCTCGTGGAAGTG GTCAAGCAAGTGAAGCCTGACGTTCTCCTAGGATTATCGGCTGTTGGAGGAEST: gi|58018827|gb|CX705569.1|CX705569
genomic: AAGAAATGGATCGCCAAGGACTGAGGGAAGGAGCAAGCCTCGTGGAAGTGgttcgtgaaa ... ttggtaacagGTCAAGCAAGTGAAGCCTGACGTTCTCCTAGGATTATCGGCTGTTGGAGGA
EST: GCCAAGGACTGAGGGAAGGAGCAAGCTTCGTGGAAGTG TTCAAGCAAGTGAAGCCTGACGTTCTCCTAGGATTATCGGCTGTGGGAGGAEST: gi|58015662|gb|CX702404.1|CX702404
genomic: GCCAAGGACTGAGGGAAGGAGCAAGCCTCGTGGAAGTGgttcgtgaaa ... ttggtaacagGTCAAGCAAGTGAAGCCTGACGTTCTCCTAGGATTATCGGCTGTTGGAGGA
EST: AGAAATGGATCGCCAAGGACTGA-GGAAGGGAGCAAGCCTCGTGGAAGTG GTCAAGCAAGTGAAGCCTGACGTTCTCCTAGGATTATCGGCTGTTGGAGGAEST: gi|9264573|gb|BE352720.1|BE352720
genomic: AGAAATGGATCGCCAAGGACTGAGGGAA-GGAGCAAGCCTCGTGGAAGTGgttcgtgaaa ... ttggtaacagGTCAAGCAAGTGAAGCCTGACGTTCTCCTAGGATTATCGGCTGTTGGAGGA
EST: AAGAAATGGATCGCCAAGGACTGAGGGAAGGAGCAAGCCTCGTGGAAGTG GTCAAGCAAGTGAAGCCTGACGTTCTCCTAGGATTATCGGCTGTTGGAGGAEST: gi|207738333|gb|GD716993.1|GD716993
genomic: AAGAAATGGATCGCCAAGGACTGAGGGAAGGAGCAAGCCTCGTGGAAGTGgttcgtgaaa ... ttggtaacagGTCAAGCAAGTGAAGCCTGACGTTCTCCTAGGATTATCGGCTGTTGGAGGA
EST: AAGAAATGGATCGCCAAGGACTGAGGGAAGGAGCAAGCCTCGTGGAAGTG GTCAAGCAAGTGAAGCCTGACGTTCTCCTAGGATTATCGGCTGTTGGAGGA
genomic: AAGAAATGGATCGCCAAGGACTGAGGGAAGGAGCAAGCCTCGTGGAAGTGgttcgtgaaa ... ttggtaacagGTCAAGCAAGTGAAGCCTGACGTTCTCCTAGGATTATCGGCTGTTGGAGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGACGTGAAAATATTGATCCAGATGCCCTTCCTTTTGCAAGAAATTTGAAAGAAATGGATCGCCAAGGACTGAGGGAAGGAGCAAGCCTCGTGGAAGTGgttcgtgaaaatattgctttagatgctaatatgaattattaaaatcatgatatggaataaatcaaaattctaaaaagaataattgatttagttattactt
- - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaataaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaagaa