1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
GCACAAGGGCTGCGTCGGTGCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAGgtttgtctatcaactggccctctttttcccatatccactgttatatttcatgttattaccatttctgctgtctttacttcccagcaatgtcactctatagatgagtaacaccttttgactaatttgaagtttagtctgaatgtttgttcattaaaactgttactgttttag
species | Glycine max |
transcript | GLYMA02G45610.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAG GTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTTTGTGTACATCCTEST: gi|193359948|gb|FK326720.1|FK326720
genomic: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAGgtttgtctat ... actgttttagGTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTTTGTGTACATCCT
EST: CATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTTAGATATGGAG GTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTTTGTGTACATCCTEST: gi|298181814|gb|HO025989.1|HO025989
genomic: CATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGC-TAGATATGGAGgtttgtctat ... actgttttagGTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTTTGTGTACATCCT
EST: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAG GTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTTTGTGTACATCCTEST: gi|208179591|gb|GD973594.1|GD973594
genomic: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAGgtttgtctat ... actgttttagGTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTTTGTGTACATCCT
EST: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAG GTTTCTAAACATATGAATCATTTGCTTAAAGCEST: gi|151404405|gb|EV274215.1|EV274215
genomic: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAGgtttgtctat ... actgttttagGTTTCTAAACATATGAATCATTTGCTTAAAGC
EST: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAG GTTTCTAAACATATGCATCATTTGCTTAAAGCACCATTTTGTGTACATCCTEST: gi|58023254|gb|CX709995.1|CX709995
genomic: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAGgtttgtctat ... actgttttagGTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTTTGTGTACATCCT
EST: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAG GTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTTTGTGTACATCCTEST: gi|19271087|gb|BM887343.1|BM887343
genomic: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAGgtttgtctat ... actgttttagGTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTTTGTGTACATCCT
EST: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAG GTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTTEST: gi|207792263|gb|GD764169.1|GD764169
genomic: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAGgtttgtctat ... actgttttagGTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTT
EST: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAG GTTTCTAAACATA
genomic: GCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAGgtttgtctat ... actgttttagGTTTCTAAACATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCACAAGGGCTGCGTCGGTGCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAGgtttgtctatcaactggccctctttttcccatatccactgttatatttcatgttattaccatttctgctgtctttacttcccagcaatgtcactctatagatgagtaacaccttttgactaatttgaagtttagtctgaatgtttgttcattaaaactgttactgttttag
- - - - - - - - - - - TTGAAG
- - - - - - - - - - - TGAAGA
- - - - - - - - - - - - AAGAGA