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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGACCATACTCCATGCTATCTCTCTACTTGCTCCTGTGATGGGCTCTGAAATCACTCGTTCAGAATTATTGCCTATTGTTATTACTGCATCTAAAGACAGgtattttagtttttttagtgtgattatggtaaagagtaatgttttaattacctttctaactgctgcctgttgtatcccttgtag

Basic information

species Glycine max
transcript GLYMA02G10790.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15202124|gb|BI425235.1|BI425235
EST:     ATCACTCGTTCAGAATTATTGCCTATTGTTATTACTGCATCTAAAGACAG                         AGTACCCAACATTAAGTTCAATGTGGCAAAGGTCTTGGAGTCAATCTTCCC
genomic: ATCACTCGTTCAGAATTATTGCCTATTGTTATTACTGCATCTAAAGACAGgtattttagt ... tcccttgtagAGTACCCAACATTAAGTTCAATGTGGCAAAGGTCTTGGAGTCAATCTTCCC
EST: gi|58015550|gb|CX702292.1|CX702292
EST:     ATCACTCGTTCAGAATTATTGCCTATTGTTATTACTGCATCTAAAGACAG                         AGTACCCAACATTAAGTTCAATGTGGCAAAGGTCTTGGAGTCAATCTTCCC
genomic: ATCACTCGTTCAGAATTATTGCCTATTGTTATTACTGCATCTAAAGACAGgtattttagt ... tcccttgtagAGTACCCAACATTAAGTTCAATGTGGCAAAGGTCTTGGAGTCAATCTTCCC
EST: gi|6666156|gb|AW277615.1|AW277615
EST:     ATCACTCGTTCAGAATTATTGCCTATTGTTATTACTGCATCTAAAGACAG                         AGTACCCAACATTAAGTTCAATGTGGCAAAGGTCTTGGAGTCAATCTTCCC
genomic: ATCACTCGTTCAGAATTATTGCCTATTGTTATTACTGCATCTAAAGACAGgtattttagt ... tcccttgtagAGTACCCAACATTAAGTTCAATGTGGCAAAGGTCTTGGAGTCAATCTTCCC