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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGATCGTCATAGGTAGAAGCTACTGAAATCATTGTTCTCTATGGGCCATGAAATCATTGTTCTCAATGTCGCACACCATATATGCTAGTGAGTTGTAATGgtatgaactttgtatagcatacgtaggatcgtctaccagaagagatgaattatatgaggatattcttaacatcaagatttttaatttgtag

Basic information

species Glycine max
transcript GLYMA01G42360.2
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|8669397|gb|BE190504.1|BE190504
EST:     AAATCATTGTTCTCAATGTCGCACACCATATATGCTAGTGAGTTGTAATG                         GCACACTNTGGGCCTTTTGCAAAAATACTGTGCGGCCCCATTTTTTACTAA
genomic: AAATCATTGTTCTCAATGTCGCACACCATATATGCTAGTGAGTTGTAATGgtatgaactt ... taatttgtagGCACACTTTGGGCCTTTTGCAAAAATACTGTGCGGCCCCATTTTTTACTAA
EST: gi|22524713|gb|BU083524.1|BU083524
EST:     AAATCATTGTTCTCAATGTCGCACACCATATATGCTAGTGAGTTGTAATG                         GCACACTTTGGGCCTTTTGCAAAAATACTGTGCGGCCCCATTTTTTACTAA
genomic: AAATCATTGTTCTCAATGTCGCACACCATATATGCTAGTGAGTTGTAATGgtatgaactt ... taatttgtagGCACACTTTGGGCCTTTTGCAAAAATACTGTGCGGCCCCATTTTTTACTAA