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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTAAATGCCATGTTGAAAGAACTCCCTGAGGAAGAGTTTGGCCCCGGAATAGATATTAGAGAGTACTCAATACTTGATAATCCCATCCTCCCCTCAGAGgtgaataaatttcatttccatctacatttgaaactgtgaattctcctttcttgttgtatctccctcacaaaacttatcgcctgggtctcgagttcag

Basic information

species Glycine max
transcript GLYMA01G35690.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|57574709|gb|CX547684.1|CX547684
EST:     TAGATATTAGAGAGTACTCAATACTTGATAATCCCATCCTCCCCTCAGAG                         GTGAAGAAGTCATGGCTTGATGTTCAGCTCTGTAAGGATGGAACCCAAGAT
genomic: TAGATATTAGAGAGTACTCAATACTTGATAATCCCATCCTCCCCTCAGAGgtgaataaat ... tcgagttcagGTGAAGAAGTCATGGCTTGATGTTCAGCTCTGTAAGGATGGAACCCAAGAT
EST: gi|57574398|gb|CX547373.1|CX547373
EST:     TAGATATTAGAGAGTACTCAATACTTGATAATCCCATCCTCCCCTCAGAG                         GTGAAGAAGTCATGGCTTGATGTTCAGCTCTGTAAGGATGGAACCCAAGAT
genomic: TAGATATTAGAGAGTACTCAATACTTGATAATCCCATCCTCCCCTCAGAGgtgaataaat ... tcgagttcagGTGAAGAAGTCATGGCTTGATGTTCAGCTCTGTAAGGATGGAACCCAAGAT