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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTATGCTGGATATGGGAGCAACTATGTAAATTCGCAATTGCCTACATCAGTTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtacacagcagtatttcttgtttatatatatatattctgatcttgataaacaaaacataaacaattgcaaaatttgtctaatgttgattcttttgtccgaatttcag

Basic information

species Glycine max
transcript GLYMA19G35140.3
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7232911|gb|AW568263.1|AW568263
EST:     TTCCACAAAGTACTGCATACGGAGCCTATCCTTCTGCATATCCTGCACAG                         CCGGCGGTTCCT
genomic: TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtacacagca ... cgaatttcagCCGGCGGTTCCT
EST: gi|16105366|gb|BI893106.1|BI893106
EST:     TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAG                         CCGGCGGTTCCTCAACAAAACTATGCACAACCTGTTGCAGCAGCAGCCCCT
genomic: TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtacacagca ... cgaatttcagCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTTGCAGCAGCAGCCCCT
EST: gi|14991640|gb|BI317313.1|BI317313
EST:     TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAG                         CCGGCGGTTCCTCAACAAAACTATGCACAACCTGTTGCAGCAGCAGCCCCT
genomic: TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtacacagca ... cgaatttcagCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTTGCAGCAGCAGCCCCT
EST: gi|4296151|gb|AI442434.1|AI442434
EST:     TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAG                         CCGGCGGTTCCTCAACAAAACTATGCACAACCTGTTGCAGCAGCAGCCCCT
genomic: TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtacacagca ... cgaatttcagCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTTGCAGCAGCAGCCCCT
EST: gi|105632320|gb|DW246410.1|DW246410
EST:     ACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAG                         CCGGCGGTTCCTCAACAAAACTATGCACAACCTGTTGCAGCAGCAGCCCCT
genomic: ACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtacacagca ... cgaatttcagCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTTGCAGCAGCAGCCCCT
EST: gi|151410949|gb|EV280764.1|EV280764
EST:     TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAG                         CCGGCGGTTCCTCAACAAAACTATGCACAACCTGTTGCAGCAGCAGCCCCT
genomic: TTCCACAAAGTACTGCATACGGAGCCTATCCTCCTGCATATCCTGCACAGgtacacagca ... cgaatttcagCCGGCGGTTCCTCAACAAAACTATGCACAACCTGTTGCAGCAGCAGCCCCT