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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGTTTTGTTAGACAAACATATAGCTGAGGACTCTTTTAGTGATCAAGATTTGCAGGATACTGGTCGACCAATAAAGTCTCTTCTGgtgagatactttctcaacatgactaatcctttaaattcttatttatcataccttcttttcttccgtatcccatttgcctatggatgtttttcatttttttcggtcaatctatggatgttttcctaacgaaccatgaatttcatgttgggagcag

Basic information

species Glycine max
transcript GLYMA19G32420.1
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208094158|gb|GD891545.1|GD891545
EST:     TTAGTGATCAAGATTTGCAGGATACTGGTCGACCAATAAAGTCTCTTCTG                         GTAGTTATATCTTGGGTTTGTCTGGTTGTTGCGGGGTCTGTAAAGTTCCTA
genomic: TTAGTGATCAAGATTTGCAGGATACTGGTCGACCAATAAAGTCTCTTCTGgtgagatact ... ttgggagcagGTAGTTATATCTTGGGTTTGTCTGGTTGTTGCGGGGTCTGTAAAGTTCCTA
EST: gi|298188426|gb|HO035119.1|HO035119
EST:     TTAGTGATCAAGATTTGCAGGATACTGGTCGACCAATAAAGTCTCTTCTG                         GTAGTTATATCTTGGGTTTGTCTGGTTGTTGCGGGGTCTGTAAAGTTCCTA
genomic: TTAGTGATCAAGATTTGCAGGATACTGGTCGACCAATAAAGTCTCTTCTGgtgagatact ... ttgggagcagGTAGTTATATCTTGGGTTTGTCTGGTTGTTGCGGGGTCTGTAAAGTTCCTA