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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGAGTGCGTGATCAATTATATAATTTGCAAATGCTTGAGGCAGCCCACTTCAAAATTCCACTACCCAAAGACTCAGAACGACCCAGGACTTATACTCCTgtatgcattgctagttataatcaccctcatgctcattgaaaaatctattacatgctttgatggattttttctcctcttttctttggttatgcag

Basic information

species Glycine max
transcript GLYMA19G28580.2
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22929218|gb|BU546357.1|BU546357
EST:     TCAAAATTCCACTACCCAAAGACTCAGAACGACCCAGGACTTATACTCCT                         AAGCATCCGACAATTACACCTCCTAGTTATCCTCAAGTACAGGCACCTATT
genomic: TCAAAATTCCACTACCCAAAGACTCAGAACGACCCAGGACTTATACTCCTgtatgcattg ... ggttatgcagAAGCATCCGACAATTACACCTCCTAGTTATCCTCAAGTACAGGCACCTATT
EST: gi|27426935|gb|CA938455.1|CA938455
EST:     TCAAAATTCCACTACCCAAAGACTCAGAACGACCCAGGACTTATACTCCT                         AAGCATCCGACAATTACACCTCCTAGTTATCCTCAAGTACAGGCACCTATT
genomic: TCAAAATTCCACTACCCAAAGACTCAGAACGACCCAGGACTTATACTCCTgtatgcattg ... ggttatgcagAAGCATCCGACAATTACACCTCCTAGTTATCCTCAAGTACAGGCACCTATT
EST: gi|308098428|gb|HO760169.1|HO760169
EST:     TCAAAATTCCACTACCCAAAGACTCAGAACGACCCAGGACTTATACTCCT                         AAGCATCCGACAATTACACCTCCTAGTTATCCTCAAGT
genomic: TCAAAATTCCACTACCCAAAGACTCAGAACGACCCAGGACTTATACTCCTgtatgcattg ... ggttatgcagAAGCATCCGACAATTACACCTCCTAGTTATCCTCAAGT
EST: gi|11687486|gb|BF595162.1|BF595162
EST:     TCAAAATTCCACTACCCAAAGACTCAGAACGACCCAGGACTTATACTCCT                         AAGCATCCGACAATTACACCTCCTAGTTATCCTCAAGTACAGGCACCTATT
genomic: TCAAAATTCCACTACCCAAAGACTCAGAACGACCCAGGACTTATACTCCTgtatgcattg ... ggttatgcagAAGCATCCGACAATTACACCTCCTAGTTATCCTCAAGTACAGGCACCTATT
EST: gi|7232311|gb|AW567668.1|AW567668
EST:     TCAAAATTCCACTACCCAAAGACTCAGAACGACCCAGGACTTATACTCCT                         AAGCATCCGACAATTACACCTCCTAGTTATCCTCAAGTACAGGCACCTATT
genomic: TCAAAATTCCACTACCCAAAGACTCAGAACGACCCAGGACTTATACTCCTgtatgcattg ... ggttatgcagAAGCATCCGACAATTACACCTCCTAGTTATCCTCAAGTACAGGCACCTATT