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TAACAATAATGTGCATAGTAATCATTACTTTGGAGATGATTCCAACATTATTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacctttagaagcataatgtttactgcatgtgataagaaaaattaaaaatttcaactattgctttagtagcaacgattttttctgctctgatgg...
species | Glycine max |
transcript | GLYMA18G49770.2 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGEST: gi|254324882|gb|GR834307.1|GR834307
genomic: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAG
EST: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGEST: gi|22930172|gb|BU547311.1|BU547311
genomic: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAG
EST: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGEST: gi|193697101|gb|FK635359.1|FK635359
genomic: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAG
EST: ACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGEST: gi|254336680|gb|GR842859.1|GR842859
genomic: ACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAG
EST: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGEST: gi|120491873|gb|EH220040.1|EH220040
genomic: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAG
EST: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGEST: gi|254315448|gb|GR825257.1|GR825257
genomic: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAG
EST: TGAGAATGATGCTGTTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAAGTATCTGCTTGATCTTCAAAGGGTGCAEST: gi|192300226|gb|FG989348.1|FG989348
genomic: TGAGAATGATGCTG-TTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAG-AAAAGTATCTGCTTGATCTTCAAAGGGTGCA
EST: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGEST: gi|14991984|gb|BI317657.1|BI317657
genomic: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAG
EST: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGEST: gi|254322930|gb|GR835645.1|GR835645
genomic: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAG
EST: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGEST: gi|21675558|gb|BQ627909.1|BQ627909
genomic: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAG
EST: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGEST: gi|209717386|gb|BW659062.1|BW659062
genomic: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAG
EST: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGEST: gi|120491804|gb|EH219971.1|EH219971
genomic: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAG
EST: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGEST: gi|58016406|gb|CX703148.1|CX703148
genomic: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAG
EST: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAG CTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGEST: gi|58022887|gb|CX709628.1|CX709628
genomic: TTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAG
EST: GTGGTCAAGTTGGAAGTGCCAG CTTTACAAAACCCGGGAAGAAAAGTATTTGCTTGATCTTCAAAGGGTGCA
genomic: GTGGTCAAGTTTGAAGTG-CAGgtaatttacc ... acatcaacagCTTTACAAAACCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAACAATAATGTGCATAGTAATCATTACTTTGGAGATGATTCCAACATTATTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAGTTTGAAGTGCAGgtaatttacctttagaagcataatgtttactgcatgtgataagaaaaattaaaaatttcaactattgctttagtagcaacgattttttctgctctgatgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG