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TGGATGGGGGAGGTGTTGCTAGTGGAGGTCTTCGAGAACTAATACCTTGCATTGCAAGGACAGCAGTTGCCGTTGGAGTGGATGGGATCTTCATGGAGGtatggtgaatagcctatgctagttataatttactagaataattataaaagaatgtagttcagagtaaaatctcagctatatagccatcatacttgtgattccaagatctgctattcaaagagtatctttatttagtttgtcaatcactgagcttctaaaagctttttgggttttcagg
species | Glycine max |
transcript | GLYMA18G48370.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CATTGCAAGGACAGCAGTTGCCGTTGGAGTGGATGGGATCTTCATGGAGG TGCATGATGATCCACTGAATGCACCTGTTGATGGCCCAACACAGTGGCEST: gi|12771969|gb|BG236896.1|BG236896
genomic: CATTGCAAGGACAGCAGTTGCCGTTGGAGTGGATGGGATCTTCATGGAGGtatggtgaat ... ggttttcaggTGCATGATGATCCACTGAATGCACCTGTTGATGGCCCAACACAGTGGG
EST: TTGCAAGGACAGCAGTTGCCGTTGGAGTGGATGGGATCTTCATGGAGG TGCATGATGATCCACTGAATGCACCTGTTGATGGCCCAACACAGTGGCEST: gi|192294788|gb|FG987477.1|FG987477
genomic: TTGCAAGGACAGCAGTTGCCGTTGGAGTGGATGGGATCTTCATGGAGGtatggtgaat ... ggttttcaggTGCATGATGATCCACTGAATGCACCTGTTGATGGCCCAACACAGTGGG
EST: CATTGCAAGGACAGCAGTTGCCGTTGGAGTGGATGGGATCTTCATGGAGG TGCATGATGATCCACTGAATGCACCTGTTGATGGCCCAACACAGTGGCEST: gi|193699456|gb|FK640289.1|FK640289
genomic: CATTGCAAGGACAGCAGTTGCCGTTGGAGTGGATGGGATCTTCATGGAGGtatggtgaat ... ggttttcaggTGCATGATGATCCACTGAATGCACCTGTTGATGGCCCAACACAGTGGG
EST: CATTGCAAGGACAGCAGTTGCCGTTGGAGTGGATGG-ATCTTCATGGAGG TGCATGATGATCCACTGAATGCACCTGTTGATGGCCCAACACAGTGGC
genomic: CATTGCAAGGACAGCAGTTGCCGTTGGAGTGGATGGGATCTTCATGGAGGtatggtgaat ... ggttttcaggTGCATGATGATCCACTGAATGCACCTGTTGATGGCCCAACACAGTGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGATGGGGGAGGTGTTGCTAGTGGAGGTCTTCGAGAACTAATACCTTGCATTGCAAGGACAGCAGTTGCCGTTGGAGTGGATGGGATCTTCATGGAGGtatggtgaatagcctatgctagttataatttactagaataattataaaagaatgtagttcagagtaaaatctcagctatatagccatcatacttgtgattccaagatctgctattcaaagagtatctttatttagtttgtcaatcactgagcttctaaaagctttttgggttttcagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG