1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ATGGGACTTCTCACTACATGAAAGGCCTTGTTCTCCTGCTGTGCTACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAGtaagtaaaatatatcaaatttttccaatggttacataaatagtcaaaatctatgatgccattataaatttgtaattcatgcctaaaatttgatctgttatttttcacaga
species | Glycine max |
transcript | GLYMA18G43000.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TACATTGATATTGGGGCATGCTTCTTCGTACCAAGAACACCCTTTAATAA TCAAGCTGATGTTACTAACATCEST: gi|193701153|gb|FK639996.1|FK639996
genomic: TACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAGtaagtaaaat ... ttttcacagaTCAAGCTGATGTTACTAACATC
EST: TACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAA TCAAGCTGATGTTACTAACATCACACTTAAACCAACCACTAATGCAGTTTTEST: gi|6094836|gb|AW119450.1|AW119450
genomic: TACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAGtaagtaaaat ... ttttcacagaTCAAGCTGATGTTACTAACATCACACTTAAACCAACCACTAATGCAGTTTT
EST: TACATTGTTATTGCGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAA TCAAGCTGATGTTACTAACATCEST: gi|193363948|gb|FK332596.1|FK332596
genomic: TACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAGtaagtaaaat ... ttttcacagaTCAAGCTGATGTTACTAACATC
EST: TACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAA TCAAGCTGATGTTACTAACATCACACTTAAACCAACCAACTAATGCAGTTTEST: gi|26048877|gb|CA785330.1|CA785330
genomic: TACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAGtaagtaaaat ... ttttcacagaTCAAGCTGATGTTACTAACATCACACTTAAACCAACCA-CTAATGCAGTTT
EST: TACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAA TCAAGCTGATGTTACTAACATCEST: gi|193697902|gb|FK641143.1|FK641143
genomic: TACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAGtaagtaaaat ... ttttcacagaTCAAGCTGATGTTACTAACATC
EST: TACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAA TCAAGCTGATGTTACTAACATCACACTTAAACCAACCACTAATGCAGTTTT
genomic: TACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAGtaagtaaaat ... ttttcacagaTCAAGCTGATGTTACTAACATCACACTTAAACCAACCACTAATGCAGTTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGGACTTCTCACTACATGAAAGGCCTTGTTCTCCTGCTGTGCTACATTGTTATTGGGGCATGCTTCTTCGTACAAAGAACACCCTTTAATAGtaagtaaaatatatcaaatttttccaatggttacataaatagtcaaaatctatgatgccattataaatttgtaattcatgcctaaaatttgatctgttatttttcacaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC