1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ATATGATAGTATTACTTCAAAAGACAAAAGTGGAAAGGATTGGTCATTCATACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGgtaattgattcatgttattatgacttcttgcatgttatcaacttgtggcttttatacactatgttgagtcctatttcattgactatatcaacatattgactatgttgttcttaaatgatatctcatcag
species | Glycine max |
transcript | GLYMA17G33050.4 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TTCACTAGCTTGAACAAGAACCAG AGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGGEST: gi|58022546|gb|CX709287.1|CX709287
genomic: TTCACTGGCTTGAACAAGAACCAGgtaattgatt ... atctcatcagAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
EST: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAG AGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGGEST: gi|51336363|gb|CO980229.1|CO980229
genomic: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGgtaattgatt ... atctcatcagAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
EST: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAG AGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGGEST: gi|193693875|gb|FK628193.1|FK628193
genomic: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGgtaattgatt ... atctcatcagAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
EST: AACAAGAACCAG AGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGGEST: gi|120492269|gb|EH220436.1|EH220436
genomic: AACAAGAACCAGgtaattgatt ... atctcatcagAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
EST: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAG AGTGACAACATGACANACAAGTGGCACGTATACATGACAAAGGATGGAAGGEST: gi|151403656|gb|EV273466.1|EV273466
genomic: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGgtaattgatt ... atctcatcagAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
EST: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAG AGTGACAACATGACAAACAGGTGGCACGTATACATGACAAAGGATGGAAGGEST: gi|58022284|gb|CX709025.1|CX709025
genomic: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGgtaattgatt ... atctcatcagAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
EST: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAG AGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGGEST: gi|209711313|gb|BW683850.1|BW683850
genomic: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGgtaattgatt ... atctcatcagAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
EST: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAG AGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGGEST: gi|302141298|gb|HO212174.1|HO212174
genomic: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGgtaattgatt ... atctcatcagAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
EST: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAG AGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGGEST: gi|208329212|gb|GE126758.1|GE126758
genomic: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGgtaattgatt ... atctcatcagAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
EST: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAG AGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGGEST: gi|151395412|gb|EV265289.1|EV265289
genomic: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGgtaattgatt ... atctcatcagAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
EST: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAG AGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGGEST: gi|120491497|gb|EH219664.1|EH219664
genomic: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGgtaattgatt ... atctcatcagAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
EST: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAG AGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGGEST: gi|120530683|gb|EH258816.1|EH258816
genomic: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGgtaattgatt ... atctcatcagAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
EST: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAG AGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
genomic: TACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGgtaattgatt ... atctcatcagAGTGACAACATGACAAACAAGTGGCACGTATACATGACAAAGGATGGAAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATGATAGTATTACTTCAAAAGACAAAAGTGGAAAGGATTGGTCATTCATACTTAAGCAGATAGGCATGTTCTCATTCACTGGCTTGAACAAGAACCAGgtaattgattcatgttattatgacttcttgcatgttatcaacttgtggcttttatacactatgttgagtcctatttcattgactatatcaacatattgactatgttgttcttaaatgatatctcatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC