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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGGTTCTCTCAGgtgggtgtttttcaagccaagttgaagcctcttttgcaattattgatacacagttgaatatttgatgaaattattaacttattatcaatttgcttcttat...

Basic information

species Glycine max
transcript GLYMA16G27970.1
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7284482|gb|AW597072.1|AW597072
EST:     AGCCAGGGCAGGTGGGTTCTCTCAG                         ATGGCCAATGCTGCGGCAATTGCAGCTGCCTTTGGGGGAGGTTTGCCTCCT
genomic: AGCCAGGGCAGGTGGGTTCTCTCAGgtgggtgttt ... tgaattttagATGGCCAATGCTGCGGCAATTGCAGCTGCCTTTGGGGGAGGTTTGCCTCCT
EST: gi|61241638|gb|DN591029.1|DN591029
EST:     AGCCAGGGCAGGTGGGTTCTCTCAG                         ATGGCCAATGCTGCGGCAATTGCAGCTGCCTTTGGGGGAGGTTTGCCTCCT
genomic: AGCCAGGGCAGGTGGGTTCTCTCAGgtgggtgttt ... tgaattttagATGGCCAATGCTGCGGCAATTGCAGCTGCCTTTGGGGGAGGTTTGCCTCCT
EST: gi|192326435|gb|FK017707.1|FK017707
EST:     AGCCAGGGCAGGTGGGTTCTCTCAG                         ATGGCCAATGCTGCGGCAATTGCAGCTGCCTTTGGGGGAGGTTTGCCTCCT
genomic: AGCCAGGGCAGGTGGGTTCTCTCAGgtgggtgttt ... tgaattttagATGGCCAATGCTGCGGCAATTGCAGCTGCCTTTGGGGGAGGTTTGCCTCCT
EST: gi|193348643|gb|FK317733.1|FK317733
EST:     AGCCAGGGCAGGTGGGTTCTCTCAG                         ATGGCCAATGCTGCGGCAATTGCAGCTGCCTTTGGGGGAGGTTTGCCTCCT
genomic: AGCCAGGGCAGGTGGGTTCTCTCAGgtgggtgttt ... tgaattttagATGGCCAATGCTGCGGCAATTGCAGCTGCCTTTGGGGGAGGTTTGCCTCCT