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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCAAACCGAGAGTCAGCCAGGAGGTCAAGATTACGCAAGCAGgtgactttctaatatctatttcgtgcacccttgttaggcaagagaccagaagtatccttaattgcatcgtatttggagggtagaacctagaggatatactatatgactatgcatattcatactaccattttataattgacaagagagagaaaatgatgtgttttacatttcttgtaccaaccag

Basic information

species Glycine max
transcript GLYMA16G25600.2
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151402272|gb|EV272085.1|EV272085
EST:     GGAAACAGTCAAACCGAGAGTCAGCCAGGAGGTCAAGATTACGCAAGCAG                         GCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAATCGCTGGGAGGTGAGAAT
genomic: GGAAACAGTCAAACCGAGAGTCAGCCAGGAGGTCAAGATTACGCAAGCAGgtgactttct ... taccaaccagGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAATCGCTGGGAGGTGAGAAT
EST: gi|23064117|gb|BU578890.1|BU578890
EST:     GGAAACAGTCAAACCGAGAGTCAACCAGGAGGTCAAGATTACGCAAGCAG                         GCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAATCGCTGGGAGGTGAGAAT
genomic: GGAAACAGTCAAACCGAGAGTCAGCCAGGAGGTCAAGATTACGCAAGCAGgtgactttct ... taccaaccagGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAATCGCTGGGAGGTGAGAAT
EST: gi|20448522|gb|BQ252646.1|BQ252646
EST:     GGAAACAGTCAAACCGAGAGTCAGCCAGGAGGTCAAGATTACGCAAGCAG                         GCTGAGTGTGAAGAGTTACAAAAGAGGGTGGGAATCGCTGGGGAGGTGAGA
genomic: GGAAACAGTCAAACCGAGAGTCAGCCAGGAGGTCAAGATTACGCAAGCAGgtgactttct ... taccaaccagGCTGAGTGTGAAGAGTTACAAAAGAGGGTGG-AATCGCTGGG-AGGTGAGA
EST: gi|254333244|gb|GR850494.1|GR850494
EST:     GGAAACAGTCAAACCGAGAGTCAGCCAGGAGGTCAAGATTACGCAAGCAG                         GCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAATCGCTGGGAGGTGAGAAT
genomic: GGAAACAGTCAAACCGAGAGTCAGCCAGGAGGTCAAGATTACGCAAGCAGgtgactttct ... taccaaccagGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAATCGCTGGGAGGTGAGAAT
EST: gi|22523727|gb|BU082538.1|BU082538
EST:     GGAAACAGTCAAACCGAGAGTCAGCCAGGAGGTCAAGATTACGCAAGCAG                         GCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAATCGCTGGGAGGTGAGAAT
genomic: GGAAACAGTCAAACCGAGAGTCAGCCAGGAGGTCAAGATTACGCAAGCAGgtgactttct ... taccaaccagGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAATCGCTGGGAGGTGAGAAT