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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTGTGGATCATTGCTATTCTGCAGAATTGGCAGGCAACAACGATTGGTATAAGACTGTTGTCTTATCAGGGGGAACTGCGTGTTTACCTGGTTTAGCAGgtctctctctctctctctaggcactttacatctttgcaacagagcagaaagatgaaatgtaactacttgagatttctaattttactgttgggattgctctgtttcag

Basic information

species Glycine max
transcript GLYMA16G19540.1
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10845404|gb|BF068541.1|BF068541
EST:     TAAGACTGTTGTCTTATCAGGGGGAACTGCGTGTTTACCTGGTTTAGCAG                         AAAGGTTAGAAAAGGAACTCCATTCATTACTTCCTCCTTATATGTCCAATG
genomic: TAAGACTGTTGTCTTATCAGGGGGAACTGCGTGTTTACCTGGTTTAGCAGgtctctctct ... tctgtttcagAAAGGTTAGAAAAGGAACTCCATTCATTACTTCCTCCTTATATGTCCAATG
EST: gi|254318482|gb|GR832650.1|GR832650
EST:     TAAGACTGTTGTCTTATCAGGGGGAACTGCGTGTTTACCTGGTTTAGCAG                         AAAGGTTAGAAAAGGAACTCCATTCATTACTTCCTCCTTATATGTCCAATG
genomic: TAAGACTGTTGTCTTATCAGGGGGAACTGCGTGTTTACCTGGTTTAGCAGgtctctctct ... tctgtttcagAAAGGTTAGAAAAGGAACTCCATTCATTACTTCCTCCTTATATGTCCAATG
EST: gi|9204527|gb|BE330751.1|BE330751
EST:     TAAGACTGTTGTCTTATCAGGGGGAACTGCGTGTTTACCTGGTTTAGCAG                         AAAGGTTAGAAAAGGAACTCCATTCATTACTTCCTCCTTATATGTCCAATG
genomic: TAAGACTGTTGTCTTATCAGGGGGAACTGCGTGTTTACCTGGTTTAGCAGgtctctctct ... tctgtttcagAAAGGTTAGAAAAGGAACTCCATTCATTACTTCCTCCTTATATGTCCAATG
EST: gi|18724477|gb|BM523565.1|BM523565
EST:     TAAGACTGTTGTCTTATCAGGGGGAACTGCGTGTTTACCTGGTTTAGCAG                         AAAGGTTAGAAAAGGAACTCCATTCATTACTTCCTCCTTATATGTCCAATG
genomic: TAAGACTGTTGTCTTATCAGGGGGAACTGCGTGTTTACCTGGTTTAGCAGgtctctctct ... tctgtttcagAAAGGTTAGAAAAGGAACTCCATTCATTACTTCCTCCTTATATGTCCAATG