1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GTGATAATTTAATTGTGGGTAGCAAAGAGGGGAAGATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAAgtaagtctttctattttatctgctaattgaaagcaatgtcaaactcgttacattcttttctgtcagagtggttctctgcttatattatacagtatgggct...
species | Glycine max |
transcript | GLYMA16G00540.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCGTATAAAATTCTTAA GTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCCTEST: gi|192317825|gb|FK010187.1|FK010187
genomic: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAAgtaagtcttt ... tacattgcagGTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTT
EST: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAA GTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTTEST: gi|6454193|gb|AW184806.1|AW184806
genomic: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAAgtaagtcttt ... tacattgcagGTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTT
EST: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAA GTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTTEST: gi|151411237|gb|EV281048.1|EV281048
genomic: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAAgtaagtcttt ... tacattgcagGTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTT
EST: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAA GTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTTEST: gi|192317824|gb|FK010186.1|FK010186
genomic: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAAgtaagtcttt ... tacattgcagGTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTT
EST: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAA GTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTTEST: gi|58021823|gb|CX708564.1|CX708564
genomic: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAAgtaagtcttt ... tacattgcagGTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTT
EST: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAA GTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTTEST: gi|51337601|gb|CO981467.1|CO981467
genomic: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAAgtaagtcttt ... tacattgcagGTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTT
EST: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAA GTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTTEST: gi|23730690|gb|BU763441.1|BU763441
genomic: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAAgtaagtcttt ... tacattgcagGTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTT
EST: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCGTATAAAATTCTTAA GTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCCTEST: gi|22932695|gb|BU549834.1|BU549834
genomic: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAAgtaagtcttt ... tacattgcagGTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTT
EST: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAA GTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTTEST: gi|7590096|gb|AW705856.1|AW705856
genomic: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAAgtaagtcttt ... tacattgcagGTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTT
EST: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCGTATAAAATTCTTAA GTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCCT
genomic: ATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAAgtaagtcttt ... tacattgcagGTGTCACCCAAAAGATATCAACAATGTCATCTTTCATCGCTCGTATCCCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGATAATTTAATTGTGGGTAGCAAAGAGGGGAAGATGTGTTGGTTTGACATGGACCTTTCATCTAAACCATATAAAATTCTTAAgtaagtctttctattttatctgctaattgaaagcaatgtcaaactcgttacattcttttctgtcagagtggttctctgcttatattatacagtatgggct
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