1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTGgtaagataatcagttatcagcctagcattccatttcaagattgggatgaaatggaggagaggataacattttaacttgaatttattttgatatatctcacag
species | Glycine max |
transcript | GLYMA15G06100.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTG GAATCTGGCCAAATATCTGTCACTGACTATGTCCGGTTGACAAGCACTGAAEST: gi|11274766|gb|BF325101.1|BF325101
genomic: GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTGgtaagataat ... tatctcacagGAATCTGGCCAAATATCTGTCACTGACTATGTCCGGTTGACAAGCACTGAA
EST: GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTG GAATCTGGCCAAATATCTGTCACTGACTATGTEST: gi|37995958|gb|CF807547.1|CF807547
genomic: GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTGgtaagataat ... tatctcacagGAATCTGGCCAAATATCTGTCACTGACTATGT
EST: GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTG GAATCTGGCCAAATATCTGTCACTGACTATGTCCGGTTGACAAGCACTGAAEST: gi|27445929|gb|CA953052.1|CA953052
genomic: GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTGgtaagataat ... tatctcacagGAATCTGGCCAAATATCTGTCACTGACTATGTCCGGTTGACAAGCACTGAA
EST: GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTG GAATCTGGCCAAATATCTGTCACTGACTATGTCCGGTTGACAAGCACTGAAEST: gi|298175277|gb|HO018158.1|HO018158
genomic: GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTGgtaagataat ... tatctcacagGAATCTGGCCAAATATCTGTCACTGACTATGTCCGGTTGACAAGCACTGAA
EST: GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTG GAATCTGGCCAAATATCTGTCACTGACTATGTCCGGTTGACAAGCACTGAAEST: gi|14991023|gb|BI316696.1|BI316696
genomic: GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTGgtaagataat ... tatctcacagGAATCTGGCCAAATATCTGTCACTGACTATGTCCGGTTGACAAGCACTGAA
EST: GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTG GAATCTGGCCAAATATCTGTCACTGACTATGTCCGGTTGACAAGCACTGAA
genomic: GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTGgtaagataat ... tatctcacagGAATCTGGCCAAATATCTGTCACTGACTATGTCCGGTTGACAAGCACTGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATTGAAGAAAGGATGCATTTGGTATGGGATATCATGGTGgtaagataatcagttatcagcctagcattccatttcaagattgggatgaaatggaggagaggataacattttaacttgaatttattttgatatatctcacag
- TTGAAG
- - TGAAGA
- - - AAGAAA
- - - - - AGGATG