1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GAAGGAACCTCAAATTATTTTAAAGGGTTGATGCTTATACTATGCTATCTAATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGAgttgctgagaatatactgcacagattcacagtagagttatataatgcagaatctagatgaatctcctctacttctctttttgcttagtttcatgtttcac...
species | Glycine max |
transcript | GLYMA15G00380.2 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CTAATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGA -TGA---CTAAATATTTAGTGTAGGTGTGGCAGTTGTCAATGCTGCATTTCEST: gi|209715668|gb|BW674354.1|BW674354
genomic: CTAATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGAgttgctgaga ... tctggtacagGTGATGACTAAATATTTAGTGTAGGTGTGGCAGTTGTCAATGCTGCATTTC
EST: CTAATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAA---GTG- GTGATGACTAAATATTTAGTGTAGGTGTGGCAGTTGTCAATGCTGCATTTCEST: gi|208047251|gb|GD844348.1|GD844348
genomic: CTAATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGAgttgctgaga ... tctggtacagGTGATGACTAAATATTTAGTGTAGGTGTGGCAGTTGTCAATGCTGCATTTC
EST: CTAATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGA -TGA---CTAAATATTTAGTGTAGGTGTGGCAGTTGTCAEST: gi|21887557|gb|BQ740770.1|BQ740770
genomic: CTAATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGAgttgctgaga ... tctggtacagGTGATGACTAAATATTTAGTGTAGGTGTGGCAGTTGTCA
EST: CTAATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGA -TGA---CTAAATATTTAGTGTAGGTGTGGCAGTTGTCAATGCTGCATTTC
genomic: CTAATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGAgttgctgaga ... tctggtacagGTGATGACTAAATATTTAGTGTAGGTGTGGCAGTTGTCAATGCTGCATTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGGAACCTCAAATTATTTTAAAGGGTTGATGCTTATACTATGCTATCTAATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGAgttgctgagaatatactgcacagattcacagtagagttatataatgcagaatctagatgaatctcctctacttctctttttgcttagtttcatgtttcac
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