1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
TTACAGCCAGTTGACATGTTCCCACACACCCCTCATATTGAGTGTGTTTGCCTTCTGGAGCTTCAGTAATCTGTGATCAATTAAAACGTTCCATTTCAAGgtcaggcactatttcattttctttgctacatttggaagttgggagtttgcaatttggatgtctgatgaatttttagtgactgttttgtttgaaatatcta...
species | Glycine max |
transcript | GLYMA13G42890.2 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CCTTCTGGAGCTTCAGTAATCTGTGATCAATTAAAACGTTCCATTTCAAG GGGATTACAAGCTTAATACAAGATGCAACTCAAGGTTGGGTCTTCAAGGTGEST: gi|193691930|gb|FK631013.1|FK631013
genomic: CCTTCTGGAGCTTCAGTAATCTGTGATCAATTAAAACGTTCCATTTCAAGgtcaggcact ... tggctttcagGGGATTACAAGCTTAATACAAGATGCAACTCAAGGTTGGGTCTTCAAGGTG
EST: AATCTGTGATCAATTAAAACGTTCCATTTCAAG GGGATTACAAGCTTAATACAAGATGCAACTCAAGGTTGGGTCTTCAAGGTG
genomic: AATCTGTGATCAATTAAAACGTTCCATTTCAAGgtcaggcact ... tggctttcagGGGATTACAAGCTTAATACAAGATGCAACTCAAGGTTGGGTCTTCAAGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTACAGCCAGTTGACATGTTCCCACACACCCCTCATATTGAGTGTGTTTGCCTTCTGGAGCTTCAGTAATCTGTGATCAATTAAAACGTTCCATTTCAAGgtcaggcactatttcattttctttgctacatttggaagttgggagtttgcaatttggatgtctgatgaatttttagtgactgttttgtttgaaatatcta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT