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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCACGAGGAATTTAAAGTTCCCATCATAACATGGGAGTCTGATAACGTGCTGGTTATTGCAGTTCGTGACAAGGACCATTTCTATGATGATATCCTTGGgtttgtttcattttataaacttcgtattttgtaaaatatgtatgtgtgtgcatgcacatttaattataacaattgtcttaagacattggttaagaaaaca...

Basic information

species Glycine max
transcript GLYMA13G33580.1
intron # 10
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA13G33580.1 (Glycine max), 5'ss of exon 10
lower sequence: Vv19s0138g00140.t01 (Vitis vinifera), 5'ss of exon 10
GGCACGAGGAATTTAAAGTTCCCATCATAACATGGGAGTCTGATAACGTGCTGGTTATTGCAGTTCGTGACAAGGACCATTTCTATGATGATATCCTTGGgtttgtttcattttataaacttcgtattttgtaaaatatgtatgtgtgtgcatgcacatttaattataacaat-tgtctta-agacattggttaagaaaaca-----
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GGAATGAAGAATTCAAGATCCCCATCTGTTCATGGGAGTTGCCTAATATGCTAGTCATTGAAGTTCGTGACAAAGACCATTTTGTTGACGATACCCTTGGgtttgtttc------taaacttcacattaaacaatgtgta-gtacatatagatctcttttgtgttataaaaacctgtggtacaggttttggtttctaagttgagttt