1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
AGAAGGTTTACCTCTGAGGAAGTCTGAGGAGGCTTTCTATCTAAACTGGGCTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAGgttcagcttcacttctcatgttctaatctttactaatgattagtcaatcttatatattaatattaagatactgtaatatttgacag
species | Glycine max |
transcript | GLYMA13G15140.2 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CTGTTCACTCATTAAGGATCACCAACTGTGGTGTGGAGGACATTACTCAG ATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATCEST: gi|16343668|gb|BI969263.1|BI969263
genomic: CTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAGgttcagcttc ... tatttgacagATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATC
EST: CTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAG ATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATCEST: gi|22928906|gb|BU546045.1|BU546045
genomic: CTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAGgttcagcttc ... tatttgacagATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATC
EST: CTGTTCACTCATTTAGGATTACCNNNTGTGGTGTGGAGGACACTACTCAG ATTCACACTCACATGTGGTACTCCAACTTCAATGACATCATTCACTCAATCEST: gi|58025149|gb|CX711890.1|CX711890
genomic: CTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAGgttcagcttc ... tatttgacagATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATC
EST: CT-TTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAG ATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATCEST: gi|209726049|gb|BW672775.1|BW672775
genomic: CTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAGgttcagcttc ... tatttgacagATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATC
EST: CTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAG ATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATCEST: gi|19347064|gb|BM891944.1|BM891944
genomic: CTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAGgttcagcttc ... tatttgacagATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATC
EST: CTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAG ATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATCEST: gi|193415380|gb|FK380200.1|FK380200
genomic: CTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAGgttcagcttc ... tatttgacagATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATC
EST: CTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAG ATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATCEST: gi|209720064|gb|BW651120.1|BW651120
genomic: CTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAGgttcagcttc ... tatttgacagATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATC
EST: CTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAG ATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATC
genomic: CTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAGgttcagcttc ... tatttgacagATTCACACTCACATGTGCTACTCCAACTTCAATGACATCATTCACTCAATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAAGGTTTACCTCTGAGGAAGTCTGAGGAGGCTTTCTATCTAAACTGGGCTGTTCACTCATTTAGGATTACCAACTGTGGTGTGGAGGACACTACTCAGgttcagcttcacttctcatgttctaatctttactaatgattagtcaatcttatatattaatattaagatactgtaatatttgacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA