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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTTTGCCACAACAGATCTGCTCTCAAATTGGTTTATGTACTTTTGATGGTACTCAAGGTgtaaggtatgatctgatcaacctattgtgttctgataaatgcatttggatgatcaattgtgttgtacatgaaaggaaaaatattgacaaattctcctataaattttagtattggcatccagagtgtggttgataaaaacatag

Basic information

species Glycine max
transcript GLYMA12G31880.1
intron # 10
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA12G31880.1 (Glycine max), 5'ss of exon 10
lower sequence: LOC_Os01g47410.2 (Oryza sativa), 5'ss of exon 10
GCTTTGCCACAACAGATCTGCTCTCAAATTGGTTTATGTACTTTTGATGGTACTCAAGGTgtaaggtatgatctgatcaacctattgtgttct-gataaatgcatttggatgatcaattgtgttgtacatgaaaggaaaaatattgacaaattctcctataa-attttagtattggcatccagagtgtggttgataaaaacatag
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ACAAAACCAGCGAAAGTATGCTCTTCGGTCGGTTTATGTACTTTTGATGGTACTCATGGTGTTAGgtaagatttg-tggatttgctgttttttagatattgggaactgtccagcctctacagttgtgggtttactgtgga---tggataattgaatgcgtagcatttta------------------------------------