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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCGATATCACAGCAGGAAAAAACTAGCAGAACAGCGACCACGTATTAAGGGACAATTTGTCAGACGAATAGTGTATGgtgctgcatggctgggttcattttatatttttatgttgcgttatgcaagtgctgggttaacttctgtccaattttttctcag

Basic information

species Glycine max
transcript GLYMA12G07860.1
intron # 10
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA12G07860.2 (Glycine max), 5'ss of exon 7
lower sequence: Vv06s0004g03660.t01 (Vitis vinifera), 5'ss of exon 2
GTTCGATATCACAGCAGGAAAAAACTAGCAGAACAGCGACCACGTATTAAGGGACAATTTGTCAGACGAATAGTGTATGgtg------ctgcatggctgggttcattttatatttttatgttgcgttatgcaagtgctgggt-taacttctgtccaattttttctcag
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GTTCGTTACCAAAGCAGGAAGAAACTGGCAGAACAACGACCACGTATTCGAGGACAATTTGTCCGGCAAAATGTgtatgctaacacaattccataacgcagactaccacactagttcatcatttcttttgctttctttaagtctcactcgtgct---ttgttttccag