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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAGAGCCTCCTAGACAATTTAGGATCGTGATTCCAAAAATACCAGCTTATTTTACGgtatgaatattccataaatacttctgtttatatatggttttgccaatattgatctttacaattttaatttttttgggaagtgaaaggcaaaaatttattt...

Basic information

species Glycine max
transcript GLYMA11G33970.1
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209718099|gb|BW677396.1|BW677396
EST:     CTCCTAGACAATTTAGGATCGTGATTCCAAAAATACCAGCTTATTTTACG                         GGAACGGGAGATCTCATGACTGCACTTCTTCTTGGTTGGAGCAAT
genomic: CTCCTAGACAATTTAGGATCGTGATTCCAAAAATACCAGCTTATTTTACGgtatgaatat ... atgtttgtagGGAACGGGAGATCTCATGACTGCACTTCTTCTTGGTTGGAGCAAT
EST: gi|58016835|gb|CX703577.1|CX703577
EST:     CTCCTAGACAATTTAGGATCGTGATTCCAAAAATACCAGCTTATTTTACG                         GGAACGGGAGATCTCATGACTGCACTTCTTCTTGGTTGGAGCAAT
genomic: CTCCTAGACAATTTAGGATCGTGATTCCAAAAATACCAGCTTATTTTACGgtatgaatat ... atgtttgtagGGAACGGGAGATCTCATGACTGCACTTCTTCTTGGTTGGAGCAAT
EST: gi|58023232|gb|CX709973.1|CX709973
EST:     CTCCTAGACAATTTAGGATCGTGATTCCAAAAATACCAGCTTATTTTACG                         GGAACGGGAGATCTCATGACTGCACTTCTTCTTGGTTGGAGCAAT
genomic: CTCCTAGACAATTTAGGATCGTGATTCCAAAAATACCAGCTTATTTTACGgtatgaatat ... atgtttgtagGGAACGGGAGATCTCATGACTGCACTTCTTCTTGGTTGGAGCAAT
EST: gi|151404004|gb|EV273814.1|EV273814
EST:     CTCCTAGACAATTTAGGATCGTGATTCCAAAAATACCAGCTTATTTTACG                         GGAACGGGAGATCTCATGACTGCACTTCTTCTTGGTTGGAGCAAT
genomic: CTCCTAGACAATTTAGGATCGTGATTCCAAAAATACCAGCTTATTTTACGgtatgaatat ... atgtttgtagGGAACGGGAGATCTCATGACTGCACTTCTTCTTGGTTGGAGCAAT