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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTCCCAGCCTGCATTGCTTTTTCCTCCTCTTAGACAAGTTGACGGAGTTGAAGTTCAACATGAACCTTTGGGTGGTTATATTTCTTCCTATAAAAAGCAGgttgtgttcacctttatcagttaacatttttattttctttatgttattcttaatttgtacagtcactcatgtagattctttccgtacacttgagatctaaaacatttgttgttgatcag

Basic information

species Glycine max
transcript GLYMA10G36600.1
intron # 10
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G36600.2 (Glycine max), 5'ss of exon 10
lower sequence: Vv18s0157g00020.t01 (Vitis vinifera), 5'ss of exon 11
TTCCCAGCCTGCATTGCTTTTTCCTCCTCTTAGACAAGTTGACGGAGTTGAAGTTCAACATGAACCTTTGGGTGGTTATATTTCTTCCTATAAAAAGCAGgt----------tgtgttcacctttatcagttaacatttttattttcttt-atgt-tattcttaatttgtacagtc--actcatgtagattctttccgtacacttgagatctaaaacatttgttgttgatcag-------------------------------------------------------------------
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TTCACAGCCTGCATTGCTTTTTCCTCCTCTAAGACAAGTCGAAGGATTTGAATTTCAGCATGAACCTTTAGATGGTTATATTTCATCCTACAAGAAGCAGgtattagtgacttgctttcattgtttgtgtccaactaatttattctttgggatgaatgcctccagtttttggagtgcagatcatgcattcatctacctta-acctgttattttacacacacacacacacacacacagatgcatatgcaaacatatgtataacctaacttcgtttgaaaaaaaaaaaatccctcttgccag