1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GCAAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGgtactacagatctattaaaagccctgttgaaatattcaatgattctttgatatttatgttcattcttcaagtatatgctactctttacttccaggaattc...
species | Glycine max |
transcript | GLYMA10G36580.3 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: AAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTG GTGCGGTAACTGGAGCAGTTACAACTCCTCTTGATGTAGTAAAGACCAGATEST: gi|17020608|gb|BM091642.1|BM091642
genomic: AAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGgtactacaga ... ttcctgatagGTGCGGTAACTGGAGCAGTTACAACTCCTCTTGATGTAGTAAAGACCAGAT
EST: AAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTG GTGCGGTAACTGGAGCAGTTACAACTCCTCTTGATGTAGTAAAGACCAGATEST: gi|192328906|gb|FK021375.1|FK021375
genomic: AAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGgtactacaga ... ttcctgatagGTGCGGTAACTGGAGCAGTTACAACTCCTCTTGATGTAGTAAAGACCAGAT
EST: AAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTG GTGCGGTAACTGGAGCAGTTACAACTCCTCTTGATGTAGTAAAGACCAGATEST: gi|193730714|gb|FK663980.1|FK663980
genomic: AAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGgtactacaga ... ttcctgatagGTGCGGTAACTGGAGCAGTTACAACTCCTCTTGATGTAGTAAAGACCAGAT
EST: ATCCAGAGAATGCTATGCTTGGGGCAGTGGCTG GTGCGGTAACTGGAGCAGTTACAACTCCTCTTGA
genomic: ATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGgtactacaga ... ttcctgatagGTGCGGTAACTGGAGCAGTTACAACTCCTCTTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGgtactacagatctattaaaagccctgttgaaatattcaatgattctttgatatttatgttcattcttcaagtatatgctactctttacttccaggaattc
- - AAGAGA
- - - GAGATC