1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
TGATATTTCTGAGCTTTTGGGCAGAGGTGCATTACAACTCAATTTATCCAGAAGGAGgtaacatttttatcttttataagctcttaaactgtagacggttacaattaatgtattcccacacccagttttgataatgctccattaaatctcttctact...
species | Glycine max |
transcript | GLYMA10G35300.3 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: GTGCATTACAACTCAATTTATCCAGAAGGAG ATTCAGAATTGCCCTCATCTCATACAAAGAAAAAGAAGAAATGGTGGAATTEST: gi|193311176|gb|FK274190.1|FK274190
genomic: GTGCATTACAACTCAATTTATCCAGAAGGAGgtaacatttt ... tgtcattcagATTCAGAATTGCCCTCATCTCATACAAAGAAAAAGAAGAAATGGTGGAATT
EST: GTGCATTACAACTCAATTTATCCAGAAGGAG ATTCAGAATTGCCCTCATCTCATACAAAGAAAAAGAAGAAATGGTGGAATTEST: gi|207846548|gb|GD820769.1|GD820769
genomic: GTGCATTACAACTCAATTTATCCAGAAGGAGgtaacatttt ... tgtcattcagATTCAGAATTGCCCTCATCTCATACAAAGAAAAAGAAGAAATGGTGGAATT
EST: AGGTGCATTACAACTCAATTTATCCAGAAGGAG ATTCAGAATTGCCCTCATCTCATACAAAGAAAAAGAAGAAATGGTGGAATTEST: gi|193352165|gb|FK317625.1|FK317625
genomic: AGGTGCATTACAACTCAATTTATCCAGAAGGAGgtaacatttt ... tgtcattcagATTCAGAATTGCCCTCATCTCATACAAAGAAAAAGAAGAAATGGTGGAATT
EST: GTGCATTACAACTCAATTTATCCAGAAGGAG ATTCAGAATTGCCCTCATCTCATACAAAG-AAAAGAAGAAATGGTGGAATT
genomic: GTGCATTACAACTCAATTTATCCAGAAGGAGgtaacatttt ... tgtcattcagATTCAGAATTGCCCTCATCTCATACAAAGAAAAAGAAGAAATGGTGGAATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATATTTCTGAGCTTTTGGGCAGAGGTGCATTACAACTCAATTTATCCAGAAGGAGgtaacatttttatcttttataagctcttaaactgtagacggttacaattaatgtattcccacacccagttttgataatgctccattaaatctcttctact
- - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cacaccc