1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
AAGCAGTCATCAAGGCAGTAGAGACTGCAACAAAAGAACTAAACTTGACAAGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctagagagagagagagagaggtgacaattgcttttacataagcagatattatttccttataaagtgcccaaaaacattcattcttaaaaattcaa...
species | Glycine max |
transcript | GLYMA10G32850.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAGEST: gi|13790927|gb|BG653518.1|BG653518
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAGEST: gi|213591946|gb|DB977346.1|DB977346
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAGEST: gi|21675359|gb|BQ627710.1|BQ627710
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAGEST: gi|193692910|gb|FK628491.1|FK628491
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAGEST: gi|17963753|gb|BM270498.1|BM270498
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAGEST: gi|6133980|gb|AW132430.1|AW132430
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTNTCATTCCATGTTACAAAGEST: gi|22931346|gb|BU548485.1|BU548485
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAGEST: gi|23729550|gb|BU762868.1|BU762868
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAGEST: gi|209728924|gb|BW654991.1|BW654991
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAGEST: gi|13252792|gb|BG363695.1|BG363695
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAGEST: gi|10255068|gb|BE822834.1|BE822834
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAGEST: gi|19345779|gb|BM890659.1|BM890659
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAGEST: gi|298164165|gb|HO013810.1|HO013810
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAGEST: gi|192306704|gb|FG998858.1|FG998858
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
EST: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAG GTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
genomic: AGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctaga ... ttaattgcagGTTGTCTCCAATGGGCATGATTTTCATTCCATGTTACAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGCAGTCATCAAGGCAGTAGAGACTGCAACAAAAGAACTAAACTTGACAAGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTGTTTATGGCCAGgtaatctagagagagagagagagaggtgacaattgcttttacataagcagatattatttccttataaagtgcccaaaaacattcattcttaaaaattcaa
- - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG