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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCTTTTTCCCACAATATTTGGTGTCACGTATCACTACACCAATCTTCTTTGTAAACGCGGCTTACGACTCATGGCAGgtcagttaattctgttgctcaagatacatcagtttatgtgcatagtggtgttccttgcttattgtattggtcacactagtcctatgatactgacccgaat...

Basic information

species Glycine max
transcript GLYMA09G35050.4
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10709683|gb|BF009407.1|BF009407
EST:     GTATCACTACACCAATCTTCTTTGTAAACGCGGCTTACGACTCATGGCAG                         ATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTGAAGGCCATTGGCAT
genomic: GTATCACTACACCAATCTTCTTTGTAAACGCGGCTTACGACTCATGGCAGgtcagttaat ... cttgattcagATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTGAAGGCCATTGGCAT
EST: gi|37995321|gb|CF806910.1|CF806910
EST:     GTATCACTACACCAATCTTCTTTGTAAACGCGGCTTACGACTCATGGCAG                         ATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTGAAGGCCATTGGCAT
genomic: GTATCACTACACCAATCTTCTTTGTAAACGCGGCTTACGACTCATGGCAGgtcagttaat ... cttgattcagATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTGAAGGCCATTGGCAT
EST: gi|7589608|gb|AW705379.1|AW705379
EST:     GTATCACTACACCAATCTTCTTTGTAAACGCGGCTTACGACTCATGGCAG                         ATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTGAAGGCCATTGGCAT
genomic: GTATCACTACACCAATCTTCTTTGTAAACGCGGCTTACGACTCATGGCAGgtcagttaat ... cttgattcagATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTGAAGGCCATTGGCAT
EST: gi|33389751|gb|CA852958.1|CA852958
EST:     GTATCACTACACCAATCTTCTTTGTAAACGCGGCTTACGACTCATGGCAG                         ATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTGAAGGCCATTGGCAT
genomic: GTATCACTACACCAATCTTCTTTGTAAACGCGGCTTACGACTCATGGCAGgtcagttaat ... cttgattcagATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTGAAGGCCATTGGCAT