Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCGTACATCCATTTGATGCTCAAGCTGAGGGGGAGTTAAGCCTATCAGTTGATGATTTTGTTGTAGTTCGTCAGgtatttccttgatgactgttatgctatttatgattcatcatcacctgtacttcagataaaccagattctttaaaagcttatttttttcttgtgtaaataa...

Basic information

species Glycine max
transcript GLYMA09G34950.1
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7284902|gb|AW597389.1|AW597389
EST:     CTGAGGGGGAGTTAAGCCTATCAGTTGATGATTTTGTTGTAGTTCGTCAG                         GTTGGACCCAATGGATGGTCTGAAGGAGAATGCAAAGGCAATGCTGGATGG
genomic: CTGAGGGGGAGTTAAGCCTATCAGTTGATGATTTTGTTGTAGTTCGTCAGgtatttcctt ... acatttctagGTTGGACCCAATGGATGGTCTGAAGGAGAATGCAAAGGCAATGCTGGATGG
EST: gi|209713198|gb|BW681733.1|BW681733
EST:     GGGGGAGTTAAGCCTATCAGTTGATGATTTTGTTGTAGTTCGTCAG                         GTTGGACCCAATGGATGGTCTGAAGGAGAATGCAAAGGCAATGCTGGATGG
genomic: GGGGGAGTTAAGCCTATCAGTTGATGATTTTGTTGTAGTTCGTCAGgtatttcctt ... acatttctagGTTGGACCCAATGGATGGTCTGAAGGAGAATGCAAAGGCAATGCTGGATGG