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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGAACCTCCAAACAAAACTACAGTGCACGTAGCTTGTTGAAGAGTGCCAGTATTAGTGCTTCCAAGTGTGTAGTTGTGAAACAAAAAAAAGATCCAGAGgtagctaactctatcttttcaagtgcatggctattagctgagagaaattattatatggtcaagatcatgtgatcccgaccaatatatagtaacccatgca...

Basic information

species Glycine max
transcript GLYMA08G05700.1
intron # 10
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA08G05700.2 (Glycine max), 5'ss of exon 9
lower sequence: Vv17s0000g02570.t01 (Vitis vinifera), 5'ss of exon 10
TGGAACCTCCAAACAAAACTACAGTGCACGTAGCTTGTTGAAGAGTGCCAGTATTAGTGCTTCCAAGTGTGTAGTTGTGAAACAAAAAAAAGATCCAGAGgtagctaactctatcttttcaagtgcatggctattagctgagagaaattattat--atggtcaagatcatgtgatcccgaccaatatatagtaacccatgca
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TGGACCCAGCAAGCCAAACCAAAGTGCTCGTAGCCTATTGAAGAGTGCTAGTATTAGTGCTTCCAAGTGTATAGGTGTGAAGGAACAAAAAGATGTTGAGgtaagtta-tatggctttacatatttcctgctgtttttcattttgctttgccattcacggaaattgttggtggatcatcgttgatgtaagtagaactgtct-