1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
AACTGCGGTGACTTCAGTTCATGAAATGGAGAATGGTTTCAATATATGGTCTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAGgtacttcgacatttgcacttgatgcactgttggcaattatacttattatattattaccatggtacaatgaatcatgtgtgaatgttcatacggtgatagg...
species | Glycine max |
transcript | GLYMA07G14870.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAG TTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCGGAGAAAGAGGAAEST: gi|58020037|gb|CX706779.1|CX706779
genomic: CTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAGgtacttcgac ... tgctatatagTTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCGGAGAAAGAGGAA
EST: CTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAG TTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCGGAGAAAGAGGAAEST: gi|193399267|gb|FK361773.1|FK361773
genomic: CTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAGgtacttcgac ... tgctatatagTTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCGGAGAAAGAGGAA
EST: CTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAG TTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCGGAGAAAGAGGAAEST: gi|12772952|gb|BG237879.1|BG237879
genomic: CTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAGgtacttcgac ... tgctatatagTTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCGGAGAAAGAGGAA
EST: CTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAG TTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCGGAGAAAGAGGAAEST: gi|5688006|gb|AI941021.1|AI941021
genomic: CTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAGgtacttcgac ... tgctatatagTTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCGGAGAAAGAGGAA
EST: CTGTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAG TTCTTATGGAGAEST: gi|10236285|gb|BE805173.1|BE805173
genomic: CTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAGgtacttcgac ... tgctatatagTTCTTATGGAGA
EST: CTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAG TTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCGGAGAAAGAGGAAEST: gi|58023617|gb|CX710358.1|CX710358
genomic: CTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAGgtacttcgac ... tgctatatagTTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCGGAGAAAGAGGAA
EST: CTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAG TTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCGGAGAAAGAGGAA
genomic: CTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAGgtacttcgac ... tgctatatagTTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCGGAGAAAGAGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AACTGCGGTGACTTCAGTTCATGAAATGGAGAATGGTTTCAATATATGGTCTTTCAATGGCAAGCATCTATATCGGATTCTGAAGGATCACTTCTTTCAGgtacttcgacatttgcacttgatgcactgttggcaattatacttattatattattaccatggtacaatgaatcatgtgtgaatgttcatacggtgatagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG