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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGACAATCTTACAAGCAATTTCTCTACTAGCTCCTGTTCTGGGCTCGGAGATTACTTCTTCAAAACTGCTCCCTCTGGTCATTAATGCATCAAAGGATAGgtaaaattgtgcattccttactccttttgtgtgtcttcatttgagccagtgctcatagcatgtcttgcag

Basic information

species Glycine max
transcript GLYMA07G10000.1
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207814742|gb|GD788987.1|GD788987
EST:     ATTACTTCTTCAAAACTGCTCCCTCTGGTCATTAATGCATCAAAGGATAG                         GGTACCCAATATCAAATTCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCC
genomic: ATTACTTCTTCAAAACTGCTCCCTCTGGTCATTAATGCATCAAAGGATAGgtaaaattgt ... tgtcttgcagGGTACCCAATATCAAATTCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCC
EST: gi|193512327|gb|FK468209.1|FK468209
EST:     AAAACTGCTCCCTCTGGTCATTAATGCATCAAAAGATAG                         GGTACCCAATATCAAATTCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCC
genomic: AAAACTGCTCCCTCTGGTCATTAATGCATCAAAGGATAGgtaaaattgt ... tgtcttgcagGGTACCCAATATCAAATTCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCC
EST: gi|21600503|gb|BQ610834.1|BQ610834
EST:     ATTACTTCTTCAAAACTGCTCCCTCTGGTCATTAATGCATCAAAGGATAG                         GGTACCCAATATCAAATTCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCC
genomic: ATTACTTCTTCAAAACTGCTCCCTCTGGTCATTAATGCATCAAAGGATAGgtaaaattgt ... tgtcttgcagGGTACCCAATATCAAATTCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCC
EST: gi|57575814|gb|CX548785.1|CX548785
EST:     ATTACTTCTTCAAAACTGCTCCCTCTGGTCATTAATGCATCAAAGGATAG                         GGTACCCAATATCAAATTCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCC
genomic: ATTACTTCTTCAAAACTGCTCCCTCTGGTCATTAATGCATCAAAGGATAGgtaaaattgt ... tgtcttgcagGGTACCCAATATCAAATTCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCC