1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
GTCATCTAAGGCAGATTTCACATGAAGTTTCTCAGTCCAACGTCACTGGGTGGGGTAGACGACCGGCAGCACTACGAGCTCTTAGCCAAAGATTGAGCAGgttaatatattctactaaaggggtgtgattttgttcaaattctttgcaaataaatttagaatctcacatctattttatgttatgccag
species | Glycine max |
transcript | GLYMA07G01940.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TGGGGTAGACGACCGGCAGCACTACGAGCTCTTAGCCAAAGATTGAGCAG GGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGACAACAATEST: gi|9985955|gb|BE659961.1|BE659961
genomic: TGGGGTAGACGACCGGCAGCACTACGAGCTCTTAGCCAAAGATTGAGCAGgttaatatat ... gttatgccagGGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGACAACAAT
EST: TGGGGTAGACGACCGGCAGCACTACGAGCTCTTA-CCAAAGATTGAGCAN GGGTTTTAATGAGGCACTCAATGGGTTTACTGATGANGGATGGACAACAATEST: gi|16348853|gb|BI974448.1|BI974448
genomic: TGGGGTAGACGACCGGCAGCACTACGAGCTCTTAGCCAAAGATTGAGCAGgttaatatat ... gttatgccagGGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGACAACAAT
EST: TGGGGTAGACGACCGGCAGCACTACGAGCTCTTAGCCAAAGATTGAGCAG GGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGACAACAATEST: gi|208288057|gb|GE083048.1|GE083048
genomic: TGGGGTAGACGACCGGCAGCACTACGAGCTCTTAGCCAAAGATTGAGCAGgttaatatat ... gttatgccagGGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGACAACAAT
EST: TGGGGTAGACGACCGGCAGCACTACGAGCTCTTAGCCAAAGATTGAGCAG GGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGACAACAATEST: gi|9985954|gb|BE659960.1|BE659960
genomic: TGGGGTAGACGACCGGCAGCACTACGAGCTCTTAGCCAAAGATTGAGCAGgttaatatat ... gttatgccagGGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGACAACAAT
EST: TGGGGTAGACGACCGGCAGCACTACGAGCTCTTAGCCAAAGATTGAGCAG GGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGACAACAATEST: gi|193309826|gb|FK277894.1|FK277894
genomic: TGGGGTAGACGACCGGCAGCACTACGAGCTCTTAGCCAAAGATTGAGCAGgttaatatat ... gttatgccagGGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGACAACAAT
EST: TGGGGTAGACGACCGGCAGCACTACGAGCTCTTAGCCAAAGATTGAGCAG GGGTTTTAATGAGGCACTCAATGGGTTTGCTGATGAGGGATGGACAACAATEST: gi|308098371|gb|HO760112.1|HO760112
genomic: TGGGGTAGACGACCGGCAGCACTACGAGCTCTTAGCCAAAGATTGAGCAGgttaatatat ... gttatgccagGGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGACAACAAT
EST: CACTACGAGCTCTTAGCCAAAGATTGAGCAG GGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGACAACAAT
genomic: CACTACGAGCTCTTAGCCAAAGATTGAGCAGgttaatatat ... gttatgccagGGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGACAACAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCATCTAAGGCAGATTTCACATGAAGTTTCTCAGTCCAACGTCACTGGGTGGGGTAGACGACCGGCAGCACTACGAGCTCTTAGCCAAAGATTGAGCAGgttaatatattctactaaaggggtgtgattttgttcaaattctttgcaaataaatttagaatctcacatctattttatgttatgccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG