1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
TAACATGGGTGAACAATTTGGTGTTAAGCTTTCACCAGGAGAAGCTGCAAAAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATGgtaccttctccaaactttacaatatattcttagtttgtattcatgaacaaaattttgtaccttacatgaggatggtaaaatggaggtgtggcaattccag...
species | Glycine max |
transcript | GLYMA06G46490.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: AAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATG ATGCTTTGGGCGGACAGGATTCAAAGAGGAGTTGAATCCGCGAGAAAGACGEST: gi|58024196|gb|CX710937.1|CX710937
genomic: AAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATGgtaccttctc ... gtctttatagATGCTTTGGGCGGACAGGATTCAAAGAGGAGTTGAATCCGCGAGAAAGACG
EST: AAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATG ATGCTTTGGGCGGACAGGATTCAAAGAGGAGTTGAATCCGCGAGAAAGACGEST: gi|51343414|gb|CO984147.1|CO984147
genomic: AAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATGgtaccttctc ... gtctttatagATGCTTTGGGCGGACAGGATTCAAAGAGGAGTTGAATCCGCGAGAAAGACG
EST: AAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATG ATGCTTTGGGCGGACAGGATTCAAAGAGGAGTTGAATCCGCGAGAAAGACGEST: gi|58014962|gb|CX701704.1|CX701704
genomic: AAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATGgtaccttctc ... gtctttatagATGCTTTGGGCGGACAGGATTCAAAGAGGAGTTGAATCCGCGAGAAAGACG
EST: AAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATG ATGCTTTGGGCGGACAGGATTCAAAGAGGAGTTGAATCCGCGAGAAAGACGEST: gi|57574299|gb|CX547274.1|CX547274
genomic: AAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATGgtaccttctc ... gtctttatagATGCTTTGGGCGGACAGGATTCAAAGAGGAGTTGAATCCGCGAGAAAGACG
EST: AAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATG ATGCTTTGGGCGGACAGGATTCAAAGAGGAGTTGAATCCGCGAGAAAGACGEST: gi|298197588|gb|HO045067.1|HO045067
genomic: AAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATGgtaccttctc ... gtctttatagATGCTTTGGGCGGACAGGATTCAAAGAGGAGTTGAATCCGCGAGAAAGACG
EST: AAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATG ATGCTTTGGGCGGACAGGAT
genomic: AAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATGgtaccttctc ... gtctttatagATGCTTTGGGCGGACAGGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAACATGGGTGAACAATTTGGTGTTAAGCTTTCACCAGGAGAAGCTGCAAAAGCTCATCAAGCCATGTCATCCTTATCACCGGAGAGCTTGGATAAAATGgtaccttctccaaactttacaatatattcttagtttgtattcatgaacaaaattttgtaccttacatgaggatggtaaaatggaggtgtggcaattccag
- - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaacaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggtgtgg