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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATATTTTCCAAGAAGCTGGCCTACCTCTCTGGCTGCGCCCATATGAAGTATTATGTACTTCTTCTTACACTGCTCTTATTGAAACAATTCCTGATACGgtgattccatggttacatatttcaaatttattaaaaatctatattttttttctttactaattattaaatgtatatgatttgtag

Basic information

species Glycine max
transcript GLYMA06G15820.1
intron # 10
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA06G15820.1 (Glycine max), 5'ss of exon 10
lower sequence: Vv04s0044g01210.t01 (Vitis vinifera), 5'ss of exon 9
ATATTTTCCAAGAAGCTGGCCTACCTCTCTGGCTGCGCCCATATGAAGTATTATGTACTTCTTCTTACACTGCTCTTATTGAAACAATTCCTGATACGgtgattccatggttacata-tttcaaatttattaaaaatctatattttttttctttactaattattaaatgtatatgatttgtag
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ATATATTCCAAGAAGCTGGTCTTCCTCTCTGGCTGCGCCCTTACGAAGTCCTTGTTACTTCTTCCTACACAGCTCTCATTGAAACCATTCCAGATACAgtaattttcttacttgatggttttaaatgaatttactgtgagaagatttttgatc-------tctttgatgtttatt-tttgtag