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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGACGTGAGAAACAATAGCTTGACGGGCAGTATTCCTGAAAACATAGGCAATTGTACTACTTTAGGGGTCTTgtatgtatatccaactgtatctgtgtgaccgactttgcctcaccatgttttctcttctcttttttaatatattctattgatgtcag

Basic information

species Glycine max
transcript GLYMA06G05900.1
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193373521|gb|FK340293.1|FK340293
EST:     ACGGGCAGTATTCCTGAAAACATAGGCAATTGTACTACTTTAGGGGTCTT                         GGATTTATCCTACAACAAGCTAACCGGAGAGATACCATTCAATATTGGGTA
genomic: ACGGGCAGTATTCCTGAAAACATAGGCAATTGTACTACTTTAGGGGTCTTgtatgtatat ... ttgatgtcagGGATTTATCCTACAACAAGCTAACCGGAGAGATACCATTCAATATTGGGTA
EST: gi|207764192|gb|GD738007.1|GD738007
EST:     ACGGGCAGTATTCCTGAAAACATAGGCAATTGTACTACTTTAGGGGTCTT                         GGATTTATCCTACAACAAGCTAACCGGAGAGATACCATTCAATATTGGGTA
genomic: ACGGGCAGTATTCCTGAAAACATAGGCAATTGTACTACTTTAGGGGTCTTgtatgtatat ... ttgatgtcagGGATTTATCCTACAACAAGCTAACCGGAGAGATACCATTCAATATTGGGTA
EST: gi|207789285|gb|GD760787.1|GD760787
EST:     ACGGGCAGTATTCCTGAAAACATAGGCAATTGTACTACTTTAGGGGTCTT                         GGATTTATCCTACAACAAGCTAACCGGAGAGATAACATTCAATATTGGGTA
genomic: ACGGGCAGTATTCCTGAAAACATAGGCAATTGTACTACTTTAGGGGTCTTgtatgtatat ... ttgatgtcagGGATTTATCCTACAACAAGCTAACCGGAGAGATACCATTCAATATTGGGTA
EST: gi|193419263|gb|FK382759.1|FK382759
EST:     ACGGGCAGTATTCCTGAAAACATAGGCAATTGTACTACTTTAGGGGTCTT                         GGATTTATCCTACAACAAG
genomic: ACGGGCAGTATTCCTGAAAACATAGGCAATTGTACTACTTTAGGGGTCTTgtatgtatat ... ttgatgtcagGGATTTATCCTACAACAAG