1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
TGACGTGTGCAGAAAGTGGCAAAACTGCTCTTGAAATGCTGCAGTTGCCTCACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGGgtacgcttgtttgcattgactattgattatttccctatttaatagttatattattcatgcgttttttactattctattttctctttatctctatccatca...
species | Glycine max |
transcript | GLYMA05G34310.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATNGACGG GTTTCAAGCAACTCAGCGAATTCGGATGATGGAGACAAAGGCAAATGAGCAEST: gi|58018863|gb|CX705605.1|CX705605
genomic: CACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGGgtacgcttgt ... atatttgtagGTTTCAAGCAACTCAGCGAATTCGGATGATGGAGACAAAGGCAAATGAGCA
EST: CACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGG GTTTCAAGCAACTCAGCGAATTCGGATGATGGAGACAAAGGCAAATGAGCAEST: gi|58019149|gb|CX705891.1|CX705891
genomic: CACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGGgtacgcttgt ... atatttgtagGTTTCAAGCAACTCAGCGAATTCGGATGATGGAGACAAAGGCAAATGAGCA
EST: CACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGG GTTTCAAGCAACTCAGCGAATTCGGATGATGGAGACAAAGGCAAATGAGCAEST: gi|15284786|gb|BI468677.1|BI468677
genomic: CACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGGgtacgcttgt ... atatttgtagGTTTCAAGCAACTCAGCGAATTCGGATGATGGAGACAAAGGCAAATGAGCA
EST: ATTCAAATGCCAGAAATGGACGG GTTTCAAGCAACTCAGCGAATTCGGATGATGGAGACAAAGGCAAATGAGCAEST: gi|41146381|gb|CK606592.1|CK606592
genomic: ATTCAAATGCCAGAAATGGACGGgtacgcttgt ... atatttgtagGTTTCAAGCAACTCAGCGAATTCGGATGATGGAGACAAAGGCAAATGAGCA
EST: CACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGG GTTTCAAGCAACTCAGCGAATTCGGATGATGGAGACAAAGGCAAATGAGCA
genomic: CACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGGgtacgcttgt ... atatttgtagGTTTCAAGCAACTCAGCGAATTCGGATGATGGAGACAAAGGCAAATGAGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGACGTGTGCAGAAAGTGGCAAAACTGCTCTTGAAATGCTGCAGTTGCCTCACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGGgtacgcttgtttgcattgactattgattatttccctatttaatagttatattattcatgcgttttttactattctattttctctttatctctatccatca
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