1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GATTGCTGTAAATGCTGCTGCACGGCGTGATGTCCTTGATATTGCTAGCATTTTCCGGGCTAAAGCTGTCGATGTATCTGATCACACAATAACTCTGGAGgtgaattttatgcagacttttcaaccaagtgatatggcattgtatttaatgtcaacttatattgatactcataaacatggtggatactggatacctctat...
species | Glycine max |
transcript | GLYMA05G30130.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TTTTCCGGGCTAAAGCTGTCGATGTATCTGATCACACAATAACTCTGGAG CTTACTGGAGATTTGGACAAGATGGTTGCATTGCAGAGATTGTTAGAACCAEST: gi|13477909|gb|BG507593.1|BG507593
genomic: TTTTCCGGGCTAAAGCTGTCGATGTATCTGATCACACAATAACTCTGGAGgtgaatttta ... tttgaaccagCTTACTGGAGATTTGGACAAGATGGTTGCATTACAGAGATTGTTAGAACCA
EST: TTTTCCGGGCTAAAGCTGTCGATGTATCTGATCACACAATAACTCTGGAG CTTACTGGAGATTTGGACAAGATGGTTGCATTGCAGAGATTGEST: gi|254341448|gb|GR850661.1|GR850661
genomic: TTTTCCGGGCTAAAGCTGTCGATGTATCTGATCACACAATAACTCTGGAGgtgaatttta ... tttgaaccagCTTACTGGAGATTTGGACAAGATGGTTGCATTACAGAGATTG
EST: TTTTCCGGGCTAAAGCTGTCGATGTATCTGATCACACAATAACTCTGGAG CTTACTGGAGATTTGGACAAGATGGTTGCATTACAGAGATTGTTAGAACCAEST: gi|6725650|gb|AW310049.1|AW310049
genomic: TTTTCCGGGCTAAAGCTGTCGATGTATCTGATCACACAATAACTCTGGAGgtgaatttta ... tttgaaccagCTTACTGGAGATTTGGACAAGATGGTTGCATTACAGAGATTGTTAGAACCA
EST: TTTTCCGG-CTAAAGCTGTCGATGTATCTGATCACACAATAACTCTGGAG CTTACTGGATATTTGGACAAGATGGTTGCATTACAGAGATTGTTAGAACCA
genomic: TTT-CCGGGCTAAAGCTGTCGATGTATCTGATCACACAATAACTCTGGAGgtgaatttta ... tttgaaccagCTTACTGGAGATTTGGACAAGATGGTTGCATTACAGAGATTGTTAGAACCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATTGCTGTAAATGCTGCTGCACGGCGTGATGTCCTTGATATTGCTAGCATTTTCCGGGCTAAAGCTGTCGATGTATCTGATCACACAATAACTCTGGAGgtgaattttatgcagacttttcaaccaagtgatatggcattgtatttaatgtcaacttatattgatactcataaacatggtggatactggatacctctat
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