1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CATAAATATGCTAATGAAGATGTCTCACTTGGTGCATGGTTCATTGGTCTTGAAGTTGAGCATATTGATGACCGCAATATGTGTTGTGGAACTCCTCCAGgtatataacctgaaaatatgtaaccagcaaacactcgatactgcaatatgttcttcaacttagtactagtatttgtgactttgttatgctgtcactagat...
species | Glycine max |
transcript | GLYMA04G43340.2 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TGAAGTTGAGCATATTGATGACCGCAATATGTGTTGTGGAACTCCTCCAG ACTGTGAGTGGAAGGCGCAGGCCGGTAACATATGTGTTGCATCATTTGATTEST: gi|41146199|gb|CK606410.1|CK606410
genomic: TGAAGTTGAGCATATTGATGACCGCAATATGTGTTGTGGAACTCCTCCAGgtatataacc ... gtttttgtagACTGTGAGTGGAAGGCGCAGGCCGGTAACATATGTGTTGCATCATTTGATT
EST: TGAAGTTGAGCATATTGATGACCGCAATATGTGTTGTGGAACTCCTCCAG ACTGTGAGTGGAAGGCGCAGGCCGGTAACATATGTGTTGCATCATTTGATTEST: gi|8827480|gb|BE211210.1|BE211210
genomic: TGAAGTTGAGCATATTGATGACCGCAATATGTGTTGTGGAACTCCTCCAGgtatataacc ... gtttttgtagACTGTGAGTGGAAGGCGCAGGCCGGTAACATATGTGTTGCATCATTTGATT
EST: TGAAGTTGAGCATATTGATGACCGCAATATGTGTGGTGGAACTCCTACAG ACTGTGAGTGGGAGGCGCCTGCCGGTAACATATGGGTAGCATCAEST: gi|209720191|gb|BW674529.1|BW674529
genomic: TGAAGTTGAGCATATTGATGACCGCAATATGTGTTGTGGAACTCCTCCAGgtatataacc ... gtttttgtagACTGTGAGTGGAAGGCGCAGGCCGGTAACATATGTGTTGCATCA
EST: TGAAGTTGAGCATATTGATGACCGCAATATGTGTTGTGGAACTCCTCCAG ACTGTGAGTGGAAGGCGCAGGCCGGTAACATATGTGTTGCATCATTTGATTEST: gi|51337140|gb|CO981006.1|CO981006
genomic: TGAAGTTGAGCATATTGATGACCGCAATATGTGTTGTGGAACTCCTCCAGgtatataacc ... gtttttgtagACTGTGAGTGGAAGGCGCAGGCCGGTAACATATGTGTTGCATCATTTGATT
EST: TGAAGTTGAGCATATTGATGACCGCAATATGTGTTGTGGAACTCCTCCAG ACTGTGAGTGGAAGGCGCAGGCCGGTAACATATGTGTTGCATCATTTGATTEST: gi|151412778|gb|EV282590.1|EV282590
genomic: TGAAGTTGAGCATATTGATGACCGCAATATGTGTTGTGGAACTCCTCCAGgtatataacc ... gtttttgtagACTGTGAGTGGAAGGCGCAGGCCGGTAACATATGTGTTGCATCATTTGATT
EST: TGAAGTTGAGCATATTGATGACCGCAATATGTGTTGTGGAATTCCTCCAG ACTGTGAGTGGAAGGCGCAGGCCGGTAACATATGTGTTGCATCATTTGATT
genomic: TGAAGTTGAGCATATTGATGACCGCAATATGTGTTGTGGAACTCCTCCAGgtatataacc ... gtttttgtagACTGTGAGTGGAAGGCGCAGGCCGGTAACATATGTGTTGCATCATTTGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATAAATATGCTAATGAAGATGTCTCACTTGGTGCATGGTTCATTGGTCTTGAAGTTGAGCATATTGATGACCGCAATATGTGTTGTGGAACTCCTCCAGgtatataacctgaaaatatgtaaccagcaaacactcgatactgcaatatgttcttcaacttagtactagtatttgtgactttgttatgctgtcactagat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC