1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
CTTCAACTGCTCAAAGTTTGACCAAACGACCAATGAAGGGAATGCTTACTGGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAGgtatgaaaataatcctttatgactaccatgctgatttaaatgatttgttttgctggatatctgttcatttaacattatctatttgttattag
species | Glycine max |
transcript | GLYMA04G30350.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAG ATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGGAEST: gi|209721377|gb|BW654573.1|BW654573
genomic: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAGgtatgaaaat ... ttgttattagATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGGA
EST: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAG ATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGGAEST: gi|105634473|gb|DW247563.1|DW247563
genomic: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAGgtatgaaaat ... ttgttattagATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGGA
EST: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAG ATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGGAEST: gi|193328415|gb|FK295990.1|FK295990
genomic: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAGgtatgaaaat ... ttgttattagATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGGA
EST: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAG ATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGGEST: gi|208070328|gb|GD870865.1|GD870865
genomic: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAGgtatgaaaat ... ttgttattagATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGG
EST: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAG ATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGGAEST: gi|254341544|gb|GR852681.1|GR852681
genomic: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAGgtatgaaaat ... ttgttattagATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGGA
EST: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAG ATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGGAEST: gi|16348382|gb|BI973977.1|BI973977
genomic: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAGgtatgaaaat ... ttgttattagATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGGA
EST: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAG ATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGGA
genomic: GGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAGgtatgaaaat ... ttgttattagATTTGAAACATGTTACCAGATTGCTTTGGCTATCAAGGATGAGGTTGAGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTCAACTGCTCAAAGTTTGACCAAACGACCAATGAAGGGAATGCTTACTGGCCCTGTTACTATTCTGAACTGGTCCTTTGTTAGAGATGACCAACCAAGgtatgaaaataatcctttatgactaccatgctgatttaaatgatttgttttgctggatatctgttcatttaacattatctatttgttattag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG