1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ACAAGAAGAATGAAAACAAGGAAGTCGCAGTAAACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCATgtaagtggcactcctctgactcgaaaacactttaatgtttactttagtcatgactaatgtggaaactgaattggttcaaaagttttggatagaagtatgg...
species | Glycine max |
transcript | GLYMA03G33000.4 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: AACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCAT GAGCTTGTATGCGGACTACATAGTGGAGAGCTTGAGAEST: gi|10236851|gb|BE805739.1|BE805739
genomic: AACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCATgtaagtggca ... tattacgaagGAGCTTGTATGCGGACTACATAGTGGAGAGCTTGAGA
EST: AACGACTTGTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATATATCCAT GATCTCGGATGGCGGACT-CATAGTGGAGAGCTTGAGACGGEST: gi|208043651|gb|GD843141.1|GD843141
genomic: AACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCATgtaagtggca ... tattacgaagGAGCTTGTATG-CGGACTACATAGTGGAGAGCTTGAGACGG
EST: AACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCAT GAGCTTGTATGCGGACTACATAGTGGAGAGCTTGAGACGGTAGTCGTTGATEST: gi|192296495|gb|FG989111.1|FG989111
genomic: AACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCATgtaagtggca ... tattacgaagGAGCTTGTATGCGGACTACATAGTGGAGAGCTTGAGACGGTAGTCGTTGAT
EST: AACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCAT GAGCTTGTATGCGGACTACATAGTGGAGAGCTTGAGACGGTAGTCGTTGATEST: gi|192324459|gb|FK015810.1|FK015810
genomic: AACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCATgtaagtggca ... tattacgaagGAGCTTGTATGCGGACTACATAGTGGAGAGCTTGAGACGGTAGTCGTTGAT
EST: AACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCAT GAGCTTGTATGCGGACTACATAGTGGAGAGCTTGAGACGGTAGTCGTTGATEST: gi|151404690|gb|EV274504.1|EV274504
genomic: AACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCATgtaagtggca ... tattacgaagGAGCTTGTATGCGGACTACATAGTGGAGAGCTTGAGACGGTAGTCGTTGAT
EST: AACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCAT GAGCTTGTATGCGGACTACATAGTG-AGAGCTTGAGACGGTAGTCGTTGATEST: gi|17022987|gb|BM094021.1|BM094021
genomic: AACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCATgtaagtggca ... tattacgaagGAGCTTGTATGCGGACTACATAGTGGAGAGCTTGAGACGGTAGTCGTTGAT
EST: AACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCAT GAGCTTGTATGCGGA
genomic: AACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCATgtaagtggca ... tattacgaagGAGCTTGTATGCGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAAGAAGAATGAAAACAAGGAAGTCGCAGTAAACGACTTTTTGCCTGCCTCAGCTGCTTTCGAAGCGGTTAATAGATCCATgtaagtggcactcctctgactcgaaaacactttaatgtttactttagtcatgactaatgtggaaactgaattggttcaaaagttttggatagaagtatgg
- - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT