1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GACTGTCTGTATGTCCTTATATTCATTGGTGGCTGCAATATTTGGTATGAACATACCATATACATGGAAAGCACCAGGCCACGAACATGTGTTTAAATGGgtatgtacacatcacttgcaacaatatgagaaaggaatttcaaatatcctgaccaacttttgtcagataaaggaatgttatgtatgtgtcatgtgtgagtgagtgatagagagagtatatagctttacctgattattttcaattcattttttttaatataattttag
species | Glycine max |
transcript | GLYMA03G31600.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: ACATACCATATACATGGAAAGCACCAGGCCACGAACATGTGTTTAAATGG GTGGTGATCTTTGGGGGAATGGTTTGTGCATCCTTGTTTTTATCCATTGTAEST: gi|13312668|gb|BG406319.1|BG406319
genomic: ACATACCATATACATGGAAAGCACCAGGCCACGAACATGTGTTTAAATGGgtatgtacac ... ataattttagGTGGTGATCTTTGGGGGAATGGTTTGTGCATCCTTGTTTTTATCCATTGTA
EST: ACATACCATATACATGGAAAGCACCAGGCCACGAACATGTGTTTAAATGG GTGGTGATCTTTGGGGGAATGGTTTGTGCATEST: gi|208150910|gb|GD948575.1|GD948575
genomic: ACATACCATATACATGGAAAGCACCAGGCCACGAACATGTGTTTAAATGGgtatgtacac ... ataattttagGTGGTGATCTTTGGGGGAATGGTTTGTGCAT
EST: ACATACCATATACATGGAAAGCACCAGGCCATGAACATGTGTTTAAATGG GTGGTGATCTTTGGCGGAATGGTTTGTGCATCCTTGTT
genomic: ACATACCATATACATGGAAAGCACCAGGCCACGAACATGTGTTTAAATGGgtatgtacac ... ataattttagGTGGTGATCTTTGGGGGAATGGTTTGTGCATCCTTGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACTGTCTGTATGTCCTTATATTCATTGGTGGCTGCAATATTTGGTATGAACATACCATATACATGGAAAGCACCAGGCCACGAACATGTGTTTAAATGGgtatgtacacatcacttgcaacaatatgagaaaggaatttcaaatatcctgaccaacttttgtcagataaaggaatgttatgtatgtgtcatgtgtgagtgagtgatagagagagtatatagctttacctgattattttcaattcattttttttaatataattttag
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