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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAAGCACAATGGATGCACTAGATGGAGCAGTATCAGTGGTAGGGTCTGGTGTTGGACTGGTTGGTACTGGTGTTGTTGCAGGTGCCGGTCTTGTGGGAAgtggcgtcgtcgcgggtgctgggcttgtgggaag

Basic information

species Glycine max
transcript GLYMA03G02370.2
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193417774|gb|FK383368.1|FK383368
EST:     GGTGCTGGGCTTGTGGGAA                         G
genomic: GGTGCCGGTCTTGTGGGAAgtggcgtcgt ... ttgtgggaag-
EST: gi|193417774|gb|FK383368.1|FK383368
EST:     GGTGCTGGGCTTGTGGGAA                         G
genomic: GGTGCCGGTCTTGTGGGAAgtggcgtcgt ... ttgtgggaag-
EST: gi|207719226|gb|GD699959.1|GD699959
EST:     GGTGCTGGGCTTGTGGGAA                         G
genomic: GGTGCCGGTCTTGTGGGAAgtggcgtcgt ... ttgtgggaag-
EST: gi|207719226|gb|GD699959.1|GD699959
EST:     GGTGCTGGGCTTGTGGGAA                         G
genomic: GGTGCCGGTCTTGTGGGAAgtggcgtcgt ... ttgtgggaag-
EST: gi|208317760|gb|GE112383.1|GE112383
EST:     GGTGCTGGGCTTGTGGGAA                         G
genomic: GGTGCCGGTCTTGTGGGAAgtggcgtcgt ... ttgtgggaag-
EST: gi|208317760|gb|GE112383.1|GE112383
EST:     GGTGCTGGGCTTGTGGGAA                         G
genomic: GGTGCCGGTCTTGTGGGAAgtggcgtcgt ... ttgtgggaag-
EST: gi|208166940|gb|GD962002.1|GD962002
EST:     GGTGCTGGGCTTGTGGGAA                         G
genomic: GGTGCCGGTCTTGTGGGAAgtggcgtcgt ... ttgtgggaag-
EST: gi|208040436|gb|GD841250.1|GD841250
EST:     GGTGCTGGGCTTGTGGGAA                         G
genomic: GGTGCCGGTCTTGTGGGAAgtggcgtcgt ... ttgtgggaag-
EST: gi|208040436|gb|GD841250.1|GD841250
EST:     GGTGCTGGGCTTGTGGGAA                         G
genomic: GGTGCCGGTCTTGTGGGAAgtggcgtcgt ... ttgtgggaag-
EST: gi|208045450|gb|GD841188.1|GD841188
EST:     GGTGCTGGGCTTGTGGGAA                         G
genomic: GGTGCCGGTCTTGTGGGAAgtggcgtcgt ... ttgtgggaag-