1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
CAGAAACTACATTGAGGATCTGCTAAAGAATATCAGAACTCAAGTCTTGCTGAAGCTCATCAAACCATATACAAGGATCAGGATTCCGTTTATATCCAAGgtaaatgtactcactatacttcatttccaagcttttcttccctcccagcccatcatatatgttaatgaaataaaaaggaaaataaatagtctaatacaaa...
species | Glycine max |
transcript | GLYMA03G00670.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TGAAGCTCATCAAACCATATACTAGGATCAGGATTCCGTTTATATCCAAG GAACTTAATGTGCCTGAGCATGATGTTGAGCAATTACTGGTATCACTTATTEST: gi|11411597|gb|BF423608.1|BF423608
genomic: TGAAGCTCATCAAACCATATACAAGGATCAGGATTCCGTTTATATCCAAGgtaaatgtac ... taatttgcagGAACTTAATGTGCCTGAGCATGATGTTGAGCAATTACTGGTATCACTTATT
EST: TGAAGCTCATCAAACCATATACAAGGATCAGGATTCCGTTTATATCCAAG GAACTTAATGTGCCTGAGCATGATGTTGAGCAATTACTGGTATCACTTATTEST: gi|58018332|gb|CX705074.1|CX705074
genomic: TGAAGCTCATCAAACCATATACAAGGATCAGGATTCCGTTTATATCCAAGgtaaatgtac ... taatttgcagGAACTTAATGTGCCTGAGCATGATGTTGAGCAATTACTGGTATCACTTATT
EST: TGAAGCTCATCAAACCATATACAAGGATCAGGATTCCGTTTATATCCAAG GAACTTAATGTGCCTGAGCATGATGTTGAGCAATTACTGGTATCACTTATTEST: gi|11273882|gb|BF324271.1|BF324271
genomic: TGAAGCTCATCAAACCATATACAAGGATCAGGATTCCGTTTATATCCAAGgtaaatgtac ... taatttgcagGAACTTAATGTGCCTGAGCATGATGTTGAGCAATTACTGGTATCACTTATT
EST: TGAAGCTCATCAAACCATATACAAGGATCAGGATTCCGTTTATATCCAAG GAACTTAATGTGCCTGAGCATGATGTTGAGCAATTACTGGTATCACTTATTEST: gi|193482516|gb|FK444857.1|FK444857
genomic: TGAAGCTCATCAAACCATATACAAGGATCAGGATTCCGTTTATATCCAAGgtaaatgtac ... taatttgcagGAACTTAATGTGCCTGAGCATGATGTTGAGCAATTACTGGTATCACTTATT
EST: AGGATTCCGTTTATATCCAAG GAACTTAATGTGCCTGAGCATGATGTTGAGCAATTACTGGTATCACTTATTEST: gi|58014800|gb|CX701542.1|CX701542
genomic: AGGATTCCGTTTATATCCAAGgtaaatgtac ... taatttgcagGAACTTAATGTGCCTGAGCATGATGTTGAGCAATTACTGGTATCACTTATT
EST: TGAAGCTCATCAAACCATATACAAGGATCAGGATTCCGTTTATATCCAAG GAACTTAATGTGCCTGAGCATGATGTTGAGCAATTACTGGTATCACTTATT
genomic: TGAAGCTCATCAAACCATATACAAGGATCAGGATTCCGTTTATATCCAAGgtaaatgtac ... taatttgcagGAACTTAATGTGCCTGAGCATGATGTTGAGCAATTACTGGTATCACTTATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGAAACTACATTGAGGATCTGCTAAAGAATATCAGAACTCAAGTCTTGCTGAAGCTCATCAAACCATATACAAGGATCAGGATTCCGTTTATATCCAAGgtaaatgtactcactatacttcatttccaagcttttcttccctcccagcccatcatatatgttaatgaaataaaaaggaaaataaatagtctaatacaaa
- - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccctccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaataaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggaaaata