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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTGTTGCAAATCAAAATAAGCCTCCTGAGGTTGTCAGCATCCTTGTTACCAACAAACATAAGCTTTTGCAATTTTTGGACAACTTCAATAATGACAAAGgtataaaagttcttgcttcacttctaatatgtatagttttaactggtcgtgtgagttaactaattttgtccttccttacttttcag

Basic information

species Glycine max
transcript GLYMA02G47710.1
intron # 10
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA02G47710.1 (Glycine max), 5'ss of exon 10
lower sequence: Vv12s0057g00410.t01 (Vitis vinifera), 5'ss of exon 10
TTTGTTGCAAATCAAAATAAGCCTCCTGAGGTTGTCAGCATCCTTGTTACCAACAAACATAAGCTTTTGCAATTTTTGGACAACTTCAATAATGACAAAGgtataaaag---ttcttgcttcacttctaatatgtatagt-tttaactggtcgtgtgagttaactaattttgtccttccttacttttcag
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TTTGTTGCAAATCAAAATAAGCCTCCTGAAATCGTCAGCATACTTGTCACAAATAGAAGCAAACTCCTACGATTCTTTGGCGACTTCAACATTGATAAAGgtagaaaacattttcttattcaaaacccataatgctcattattttattctctgtacggcagtacaaattgaattcttc--tcctctgcag