1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
AGAATATGAGGCAAAGAAGCAGCTTGTAGCAGATGAAATCACAAGCAGATTAGAGAATAAATTGTTTCCTGGTCTTAGATCATCCATTGATTTTATGGAGgtatggactatagcctcagacctcatagtactgaatggtatttctgtgacttcctacgttgagaaaagcaataaaataaatcaaggaggtgtgattttac...
species | Glycine max |
transcript | GLYMA02G34060.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TAGAGAATAAATTGTTTCCTGGTCTTAGATCATCCATTGATTTTATGGAG GTAGGGACACCTAAGACACACCGGCGATACCTGGCTCGTGATGAGGGAACTEST: gi|192316622|gb|FK008243.1|FK008243
genomic: TAGAGAATAAATTGTTTCCTGGTCTTAGATCATCCATTGATTTTATGGAGgtatggacta ... ctcataatagGTAGGGACACCTAAGACACACCGGCGATACCTGGCTCGTGATGAGGGAACT
EST: TAGAGAATAAATTGTTTCCTGGTCTTAGATCATCCATTGATTTTATGGAG GTAGGGACACCTAAGACACACCGGCGATACCTGGCTCGTGATGAGGGAACTEST: gi|51341204|gb|CO982521.1|CO982521
genomic: TAGAGAATAAATTGTTTCCTGGTCTTAGATCATCCATTGATTTTATGGAGgtatggacta ... ctcataatagGTAGGGACACCTAAGACACACCGGCGATACCTGGCTCGTGATGAGGGAACT
EST: TAGAGAATAAATTGTTTCCTGGTCTTAGATCATCCATTGATTTTATGGAG GTAGGGACACCTAAGACACACCGGCGATACCTGGCTCGTGATGAGGGAACTEST: gi|192316621|gb|FK008242.1|FK008242
genomic: TAGAGAATAAATTGTTTCCTGGTCTTAGATCATCCATTGATTTTATGGAGgtatggacta ... ctcataatagGTAGGGACACCTAAGACACACCGGCGATACCTGGCTCGTGATGAGGGAACT
EST: TAGAGAATAAATTGTTTCCTGGTCTTAGATCATCCATTGATTTTATGGAG GTAGGGACACCTAEST: gi|120531714|gb|EH259847.1|EH259847
genomic: TAGAGAATAAATTGTTTCCTGGTCTTAGATCATCCATTGATTTTATGGAGgtatggacta ... ctcataatagGTAGGGACACCTA
EST: TAGAGAATAAATTGTTTCCTGGTCTTAGATCATCCATTGATTTTATGGAG GTAGGGACACCTAAGACACACCGGCGATACCTGGCTCGTGATGAGGGAACT
genomic: TAGAGAATAAATTGTTTCCTGGTCTTAGATCATCCATTGATTTTATGGAGgtatggacta ... ctcataatagGTAGGGACACCTAAGACACACCGGCGATACCTGGCTCGTGATGAGGGAACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAATATGAGGCAAAGAAGCAGCTTGTAGCAGATGAAATCACAAGCAGATTAGAGAATAAATTGTTTCCTGGTCTTAGATCATCCATTGATTTTATGGAGgtatggactatagcctcagacctcatagtactgaatggtatttctgtgacttcctacgttgagaaaagcaataaaataaatcaaggaggtgtgattttac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaagcaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaataaa