1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GGTAAGTCGGGCTCTCAAGCAAAAGCTGCAGCAGGGGTTTAACAATATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAGgtaaggatggaattctgtttcttaaaagaatacaatttttacttaggcacatactgcatttaattttttaatggtgactaaggacttcaatattttaata...
species | Glycine max |
transcript | GLYMA02G16010.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: ATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAG GTTGTCACTAAATTTATCGTGGTTGTCAAATTATAGGGAAGAAATTCAGAAEST: gi|27426595|gb|CA938115.1|CA938115
genomic: ATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAGgtaaggatgg ... aacctggcagGTTGTCACTAAATTTATCGTGGTTGTCAAATTATAGGGAAGAAATTCAGAA
EST: ATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAG GTTGTCACTAAATTTATCGTGGTTGTCAAATTATAGGGAAGAAATTCAGAAEST: gi|192314161|gb|FK011533.1|FK011533
genomic: ATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAGgtaaggatgg ... aacctggcagGTTGTCACTAAATTTATCGTGGTTGTCAAATTATAGGGAAGAAATTCAGAA
EST: ATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAG GTTGTCACTAAATTTATCGTGGTTGTCAAATTATAGGGAAGAAATTCAGAAEST: gi|214003984|gb|DB985253.1|DB985253
genomic: ATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAGgtaaggatgg ... aacctggcagGTTGTCACTAAATTTATCGTGGTTGTCAAATTATAGGGAAGAAATTCAGAA
EST: ATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAG GTTGTCACTAAATTTATCGTGGTTGTCAAATTATAGGGAAGAAATTCAGAAEST: gi|7286200|gb|AW598687.1|AW598687
genomic: ATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAGgtaaggatgg ... aacctggcagGTTGTCACTAAATTTATCGTGGTTGTCAAATTATAGGGAAGAAATTCAGAA
EST: ATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAG GTTGTCACTAAATTTATCGTGGTTGTCAAATTATAGGGAAGAAATTCAGAAEST: gi|7286174|gb|AW598661.1|AW598661
genomic: ATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAGgtaaggatgg ... aacctggcagGTTGTCACTAAATTTATCGTGGTTGTCAAATTATAGGGAAGAAATTCAGAA
EST: ATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAG GTTGTCACTAAATTTATCGTGGTTGTCAAATTATAGGGAAGAAATTCAGAA
genomic: ATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAGgtaaggatgg ... aacctggcagGTTGTCACTAAATTTATCGTGGTTGTCAAATTATAGGGAAGAAATTCAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTAAGTCGGGCTCTCAAGCAAAAGCTGCAGCAGGGGTTTAACAATATGACTCTGCTTCAATTGTTATACTTGAAGAAACCAGCCGGTGCCTCAAGgtaaggatggaattctgtttcttaaaagaatacaatttttacttaggcacatactgcatttaattttttaatggtgactaaggacttcaatattttaata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA