1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTTCATTCGATCCGTGAGGCAGCTGCTAACAATTTGAAGCGCCTAGCTGAAGAATTTGGTCCTGAGTGGGCTATGCAACACATAATTCCACAGgttcatgtcttggcttaagaattattatttcagtattatacactatgcctatatgaatgtgtttgtgttggtatgtttctgtatcttctacttgaatttc...
species | Glycine max |
transcript | GLYMA02G10790.2 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TAGCTGAAGAATTTGGTCCTGAGTGGGCTATGCAACACATAATTCCACAG GTTTTGGAGATGATTAGCAATCCTCACTATTTGTATCGAATGACCATACTCEST: gi|58015550|gb|CX702292.1|CX702292
genomic: TAGCTGAAGAATTTGGTCCTGAGTGGGCTATGCAACACATAATTCCACAGgttcatgtct ... catgaaacagGTTTTGGAGATGATTAGCAATCCTCACTATTTGTATCGAATGACCATACTC
EST: TAGCTGAAGAATTTGGTCNTGAGTGGGCTATGCAACACATAATTCCACAG GTTTTGGAGATGATTAGCAATCCTCACTATTTGTATCGAATGACCATACTCEST: gi|6666156|gb|AW277615.1|AW277615
genomic: TAGCTGAAGAATTTGGTCCTGAGTGGGCTATGCAACACATAATTCCACAGgttcatgtct ... catgaaacagGTTTTGGAGATGATTAGCAATCCTCACTATTTGTATCGAATGACCATACTC
EST: TAGCTGAAGAATTTGGTCCTGAGTGGGCTATGCAACACATAATTCCACAG GTTTTGGAGATGATTAGCAATCCTCACTATTTGTATCGAATGACCATACTC
genomic: TAGCTGAAGAATTTGGTCCTGAGTGGGCTATGCAACACATAATTCCACAGgttcatgtct ... catgaaacagGTTTTGGAGATGATTAGCAATCCTCACTATTTGTATCGAATGACCATACTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCATTCGATCCGTGAGGCAGCTGCTAACAATTTGAAGCGCCTAGCTGAAGAATTTGGTCCTGAGTGGGCTATGCAACACATAATTCCACAGgttcatgtcttggcttaagaattattatttcagtattatacactatgcctatatgaatgtgtttgtgttggtatgtttctgtatcttctacttgaatttc
- - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - TGAAGA